Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC10.89□□□□□ -0.67
Sf3b6P59708 Gm38092-201ENSMUST00000195600 653 ntBASIC10.89□□□□□ -0.67
Sf3b6P59708 Gm43433-201ENSMUST00000196573 481 ntBASIC10.89□□□□□ -0.67
Sf3b6P59708 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sf3b6P59708 AC110817.1-201ENSMUST00000225706 605 ntBASIC10.89□□□□□ -0.67
Sf3b6P59708 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
Sf3b6P59708 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC10.89□□□□□ -0.67
Sf3b6P59708 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sf3b6P59708 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sf3b6P59708 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sf3b6P59708 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sf3b6P59708 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sf3b6P59708 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sf3b6P59708 AC108858.2-201ENSMUST00000228186 1425 ntBASIC10.89□□□□□ -0.67
Sf3b6P59708 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
Sf3b6P59708 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sf3b6P59708 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sf3b6P59708 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
Sf3b6P59708 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sf3b6P59708 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sf3b6P59708 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Sf3b6P59708 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Sf3b6P59708 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sf3b6P59708 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sf3b6P59708 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sf3b6P59708 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sf3b6P59708 Gm43823-201ENSMUST00000197391 1808 ntBASIC10.88□□□□□ -0.67
Sf3b6P59708 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sf3b6P59708 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sf3b6P59708 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sf3b6P59708 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sf3b6P59708 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sf3b6P59708 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sf3b6P59708 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sf3b6P59708 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sf3b6P59708 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sf3b6P59708 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sf3b6P59708 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sf3b6P59708 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Sf3b6P59708 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sf3b6P59708 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sf3b6P59708 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Sf3b6P59708 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC10.88□□□□□ -0.67
Sf3b6P59708 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sf3b6P59708 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sf3b6P59708 Gm4984-201ENSMUST00000115987 360 ntBASIC10.88□□□□□ -0.67
Sf3b6P59708 Gm15824-201ENSMUST00000119516 955 ntBASIC10.88□□□□□ -0.67
Sf3b6P59708 Gm11964-201ENSMUST00000120982 444 ntBASIC10.88□□□□□ -0.67
Sf3b6P59708 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC10.88□□□□□ -0.67
Sf3b6P59708 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sf3b6P59708 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC10.88□□□□□ -0.67
Sf3b6P59708 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC10.88□□□□□ -0.67
Sf3b6P59708 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC10.88□□□□□ -0.67
Sf3b6P59708 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sf3b6P59708 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC10.88□□□□□ -0.67
Sf3b6P59708 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sf3b6P59708 Gm8602-201ENSMUST00000184045 607 ntBASIC10.88□□□□□ -0.67
Sf3b6P59708 Gm5896-201ENSMUST00000189662 1024 ntBASIC10.88□□□□□ -0.67
Sf3b6P59708 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sf3b6P59708 Gm8598-201ENSMUST00000221184 836 ntBASIC10.88□□□□□ -0.67
Sf3b6P59708 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Sf3b6P59708 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC10.88□□□□□ -0.67
Sf3b6P59708 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sf3b6P59708 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC10.88□□□□□ -0.67
Sf3b6P59708 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Sf3b6P59708 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sf3b6P59708 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC10.88□□□□□ -0.67
Sf3b6P59708 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC10.88□□□□□ -0.67
Sf3b6P59708 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sf3b6P59708 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC10.88□□□□□ -0.67
Sf3b6P59708 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sf3b6P59708 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC10.88□□□□□ -0.67
Sf3b6P59708 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Sf3b6P59708 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC10.88□□□□□ -0.67
Sf3b6P59708 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC10.88□□□□□ -0.67
Sf3b6P59708 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sf3b6P59708 Gm45053-201ENSMUST00000206112 2499 ntBASIC10.87□□□□□ -0.67
Sf3b6P59708 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sf3b6P59708 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Sf3b6P59708 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sf3b6P59708 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sf3b6P59708 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sf3b6P59708 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sf3b6P59708 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC10.87□□□□□ -0.67
Sf3b6P59708 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sf3b6P59708 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sf3b6P59708 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sf3b6P59708 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sf3b6P59708 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sf3b6P59708 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sf3b6P59708 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Sf3b6P59708 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC10.87□□□□□ -0.67
Sf3b6P59708 Gm23119-201ENSMUST00000158610 140 ntBASIC10.87□□□□□ -0.67
Sf3b6P59708 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC10.87□□□□□ -0.67
Sf3b6P59708 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC10.87□□□□□ -0.67
Sf3b6P59708 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC10.87□□□□□ -0.67
Sf3b6P59708 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC10.87□□□□□ -0.67
Sf3b6P59708 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC10.87□□□□□ -0.67
Sf3b6P59708 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC10.87□□□□□ -0.67
Sf3b6P59708 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms