Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.53□□□□□ -0.4
Tubgcp3P58854 Gm44958-201ENSMUST00000203734 736 ntBASIC12.53□□□□□ -0.4
Tubgcp3P58854 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.53□□□□□ -0.4
Tubgcp3P58854 Gm8227-201ENSMUST00000223306 571 ntBASIC12.53□□□□□ -0.4
Tubgcp3P58854 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.53□□□□□ -0.4
Tubgcp3P58854 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tubgcp3P58854 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Tubgcp3P58854 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tubgcp3P58854 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tubgcp3P58854 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.53□□□□□ -0.4
Tubgcp3P58854 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tubgcp3P58854 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.53□□□□□ -0.4
Tubgcp3P58854 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tubgcp3P58854 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tubgcp3P58854 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.53□□□□□ -0.4
Tubgcp3P58854 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tubgcp3P58854 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Tubgcp3P58854 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tubgcp3P58854 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
Tubgcp3P58854 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tubgcp3P58854 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tubgcp3P58854 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Tubgcp3P58854 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Tubgcp3P58854 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tubgcp3P58854 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tubgcp3P58854 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tubgcp3P58854 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Tubgcp3P58854 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.52□□□□□ -0.4
Tubgcp3P58854 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.52□□□□□ -0.4
Tubgcp3P58854 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tubgcp3P58854 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Tubgcp3P58854 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tubgcp3P58854 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tubgcp3P58854 Gm10434-201ENSMUST00000101158 471 ntBASIC12.52□□□□□ -0.41
Tubgcp3P58854 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Tubgcp3P58854 Gm14999-201ENSMUST00000121039 624 ntBASIC12.52□□□□□ -0.41
Tubgcp3P58854 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Tubgcp3P58854 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.52□□□□□ -0.41
Tubgcp3P58854 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.52□□□□□ -0.41
Tubgcp3P58854 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.52□□□□□ -0.41
Tubgcp3P58854 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.52□□□□□ -0.41
Tubgcp3P58854 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Tubgcp3P58854 Gm45880-201ENSMUST00000213041 853 ntBASIC12.52□□□□□ -0.41
Tubgcp3P58854 Gm19309-201ENSMUST00000218295 205 ntBASIC12.52□□□□□ -0.41
Tubgcp3P58854 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Tubgcp3P58854 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tubgcp3P58854 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tubgcp3P58854 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Tubgcp3P58854 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tubgcp3P58854 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tubgcp3P58854 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Tubgcp3P58854 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tubgcp3P58854 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tubgcp3P58854 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Tubgcp3P58854 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Tubgcp3P58854 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tubgcp3P58854 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.52□□□□□ -0.41
Tubgcp3P58854 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Tubgcp3P58854 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.52□□□□□ -0.41
Tubgcp3P58854 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.52□□□□□ -0.41
Tubgcp3P58854 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Tubgcp3P58854 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Tubgcp3P58854 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Tubgcp3P58854 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.51□□□□□ -0.41
Tubgcp3P58854 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Tubgcp3P58854 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tubgcp3P58854 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.51□□□□□ -0.41
Tubgcp3P58854 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Tubgcp3P58854 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tubgcp3P58854 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tubgcp3P58854 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Tubgcp3P58854 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tubgcp3P58854 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tubgcp3P58854 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.51□□□□□ -0.41
Tubgcp3P58854 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Tubgcp3P58854 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Tubgcp3P58854 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.51□□□□□ -0.41
Tubgcp3P58854 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.51□□□□□ -0.41
Tubgcp3P58854 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.51□□□□□ -0.41
Tubgcp3P58854 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Tubgcp3P58854 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tubgcp3P58854 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.51□□□□□ -0.41
Tubgcp3P58854 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tubgcp3P58854 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Tubgcp3P58854 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tubgcp3P58854 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Tubgcp3P58854 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Tubgcp3P58854 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.51□□□□□ -0.41
Tubgcp3P58854 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tubgcp3P58854 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Tubgcp3P58854 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Tubgcp3P58854 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Tubgcp3P58854 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tubgcp3P58854 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Tubgcp3P58854 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.5□□□□□ -0.41
Tubgcp3P58854 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tubgcp3P58854 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.5□□□□□ -0.41
Tubgcp3P58854 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.5□□□□□ -0.41
Tubgcp3P58854 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Tubgcp3P58854 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms