Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Sssca1P56873 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC9.9□□□□□ -0.82
Sssca1P56873 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Sssca1P56873 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Sssca1P56873 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC9.9□□□□□ -0.82
Sssca1P56873 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Sssca1P56873 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC9.9□□□□□ -0.83
Sssca1P56873 Gm29100-201ENSMUST00000187564 4410 ntBASIC9.9□□□□□ -0.83
Sssca1P56873 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Sssca1P56873 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Sssca1P56873 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Sssca1P56873 AC160410.1-201ENSMUST00000219298 1972 ntBASIC9.9□□□□□ -0.83
Sssca1P56873 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Sssca1P56873 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC9.9□□□□□ -0.83
Sssca1P56873 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Sssca1P56873 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Sssca1P56873 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Sssca1P56873 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC9.9□□□□□ -0.83
Sssca1P56873 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sssca1P56873 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Sssca1P56873 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sssca1P56873 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sssca1P56873 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sssca1P56873 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Sssca1P56873 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sssca1P56873 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sssca1P56873 Gm43823-201ENSMUST00000197391 1808 ntBASIC9.89□□□□□ -0.83
Sssca1P56873 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sssca1P56873 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sssca1P56873 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sssca1P56873 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC9.89□□□□□ -0.83
Sssca1P56873 AC122291.1-201ENSMUST00000228937 5748 ntBASIC9.89□□□□□ -0.83
Sssca1P56873 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Sssca1P56873 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sssca1P56873 Dopey2-207ENSMUST00000227156 7340 ntBASIC9.89□□□□□ -0.83
Sssca1P56873 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC9.89□□□□□ -0.83
Sssca1P56873 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Sssca1P56873 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sssca1P56873 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Sssca1P56873 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC9.89□□□□□ -0.83
Sssca1P56873 Gm12091-201ENSMUST00000146791 830 ntBASIC9.89□□□□□ -0.83
Sssca1P56873 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC9.89□□□□□ -0.83
Sssca1P56873 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC9.89□□□□□ -0.83
Sssca1P56873 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sssca1P56873 Gm9022-201ENSMUST00000182482 992 ntBASIC9.89□□□□□ -0.83
Sssca1P56873 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Sssca1P56873 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Sssca1P56873 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Sssca1P56873 AC162801.1-201ENSMUST00000220612 198 ntBASIC9.89□□□□□ -0.83
Sssca1P56873 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sssca1P56873 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Sssca1P56873 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sssca1P56873 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sssca1P56873 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Sssca1P56873 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Sssca1P56873 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Sssca1P56873 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC9.89□□□□□ -0.83
Sssca1P56873 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sssca1P56873 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sssca1P56873 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sssca1P56873 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC9.89□□□□□ -0.83
Sssca1P56873 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Sssca1P56873 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sssca1P56873 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sssca1P56873 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Sssca1P56873 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sssca1P56873 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC9.88□□□□□ -0.83
Sssca1P56873 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sssca1P56873 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sssca1P56873 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Sssca1P56873 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sssca1P56873 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sssca1P56873 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Sssca1P56873 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sssca1P56873 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC9.88□□□□□ -0.83
Sssca1P56873 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sssca1P56873 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sssca1P56873 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sssca1P56873 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sssca1P56873 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sssca1P56873 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Sssca1P56873 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC9.88□□□□□ -0.83
Sssca1P56873 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC9.88□□□□□ -0.83
Sssca1P56873 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sssca1P56873 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sssca1P56873 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Sssca1P56873 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC9.88□□□□□ -0.83
Sssca1P56873 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC9.88□□□□□ -0.83
Sssca1P56873 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sssca1P56873 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC9.88□□□□□ -0.83
Sssca1P56873 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Sssca1P56873 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sssca1P56873 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC9.88□□□□□ -0.83
Sssca1P56873 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC9.88□□□□□ -0.83
Sssca1P56873 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC9.88□□□□□ -0.83
Sssca1P56873 Gm4034-201ENSMUST00000187674 480 ntBASIC9.88□□□□□ -0.83
Sssca1P56873 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Sssca1P56873 Gm38092-201ENSMUST00000195600 653 ntBASIC9.88□□□□□ -0.83
Sssca1P56873 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC9.88□□□□□ -0.83
Sssca1P56873 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC9.88□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms