Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.21□□□□□ -0.45
Atxn1P54254 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC12.21□□□□□ -0.45
Atxn1P54254 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Atxn1P54254 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Atxn1P54254 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Atxn1P54254 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Atxn1P54254 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Atxn1P54254 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Atxn1P54254 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Atxn1P54254 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Atxn1P54254 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Atxn1P54254 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Atxn1P54254 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.21□□□□□ -0.46
Atxn1P54254 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Atxn1P54254 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.46
Atxn1P54254 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Atxn1P54254 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
Atxn1P54254 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Atxn1P54254 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atxn1P54254 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atxn1P54254 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Atxn1P54254 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Atxn1P54254 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atxn1P54254 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atxn1P54254 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atxn1P54254 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atxn1P54254 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atxn1P54254 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atxn1P54254 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atxn1P54254 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Atxn1P54254 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Atxn1P54254 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atxn1P54254 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Atxn1P54254 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atxn1P54254 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Atxn1P54254 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Atxn1P54254 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atxn1P54254 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC12.2□□□□□ -0.46
Atxn1P54254 Gm14999-201ENSMUST00000121039 624 ntBASIC12.2□□□□□ -0.46
Atxn1P54254 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Atxn1P54254 Gm15881-201ENSMUST00000148792 942 ntBASIC12.2□□□□□ -0.46
Atxn1P54254 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atxn1P54254 Mir7221-201ENSMUST00000184009 72 ntBASIC12.2□□□□□ -0.46
Atxn1P54254 Gm37028-201ENSMUST00000194276 107 ntBASIC12.2□□□□□ -0.46
Atxn1P54254 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.2□□□□□ -0.46
Atxn1P54254 Gm9463-201ENSMUST00000206707 601 ntBASIC12.2□□□□□ -0.46
Atxn1P54254 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Atxn1P54254 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Atxn1P54254 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.2□□□□□ -0.46
Atxn1P54254 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atxn1P54254 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Atxn1P54254 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Atxn1P54254 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC12.2□□□□□ -0.46
Atxn1P54254 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atxn1P54254 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atxn1P54254 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Atxn1P54254 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Atxn1P54254 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atxn1P54254 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Atxn1P54254 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atxn1P54254 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Atxn1P54254 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Atxn1P54254 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atxn1P54254 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Atxn1P54254 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Atxn1P54254 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atxn1P54254 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atxn1P54254 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Atxn1P54254 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atxn1P54254 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Atxn1P54254 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atxn1P54254 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atxn1P54254 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atxn1P54254 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Atxn1P54254 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atxn1P54254 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atxn1P54254 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Atxn1P54254 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Atxn1P54254 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atxn1P54254 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atxn1P54254 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atxn1P54254 Gm5616-201ENSMUST00000165252 384 ntBASIC12.19□□□□□ -0.46
Atxn1P54254 Gm8741-201ENSMUST00000174736 384 ntBASIC12.19□□□□□ -0.46
Atxn1P54254 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Atxn1P54254 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC12.19□□□□□ -0.46
Atxn1P54254 Gm9132-201ENSMUST00000210182 832 ntBASIC12.19□□□□□ -0.46
Atxn1P54254 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC12.19□□□□□ -0.46
Atxn1P54254 Gm18974-201ENSMUST00000221478 1031 ntBASIC12.19□□□□□ -0.46
Atxn1P54254 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atxn1P54254 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atxn1P54254 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atxn1P54254 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atxn1P54254 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Atxn1P54254 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atxn1P54254 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atxn1P54254 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Atxn1P54254 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Atxn1P54254 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atxn1P54254 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atxn1P54254 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms