Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ercc3P49135 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ercc3P49135 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ercc3P49135 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
Ercc3P49135 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Ercc3P49135 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
Ercc3P49135 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ercc3P49135 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ercc3P49135 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
Ercc3P49135 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ercc3P49135 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC14.56□□□□□ -0.08
Ercc3P49135 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ercc3P49135 Gm25700-201ENSMUST00000177693 110 ntBASIC14.56□□□□□ -0.08
Ercc3P49135 Gm3096-201ENSMUST00000185770 364 ntBASIC14.56□□□□□ -0.08
Ercc3P49135 AC166344.1-202ENSMUST00000224139 234 ntBASIC14.56□□□□□ -0.08
Ercc3P49135 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ercc3P49135 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ercc3P49135 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ercc3P49135 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ercc3P49135 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Ercc3P49135 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ercc3P49135 Gm5780-201ENSMUST00000217774 1834 ntBASIC14.56□□□□□ -0.08
Ercc3P49135 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ercc3P49135 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ercc3P49135 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ercc3P49135 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Ercc3P49135 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ercc3P49135 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ercc3P49135 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC14.56□□□□□ -0.08
Ercc3P49135 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ercc3P49135 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ercc3P49135 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC14.56□□□□□ -0.08
Ercc3P49135 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Ercc3P49135 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ercc3P49135 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ercc3P49135 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Ercc3P49135 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ercc3P49135 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ercc3P49135 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ercc3P49135 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
Ercc3P49135 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ercc3P49135 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ercc3P49135 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ercc3P49135 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ercc3P49135 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ercc3P49135 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ercc3P49135 Nudt18-202ENSMUST00000228554 3619 ntBASIC14.55□□□□□ -0.08
Ercc3P49135 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ercc3P49135 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ercc3P49135 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ercc3P49135 Gm15808-201ENSMUST00000119046 604 ntBASIC14.55□□□□□ -0.08
Ercc3P49135 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC14.55□□□□□ -0.08
Ercc3P49135 Gm8885-201ENSMUST00000189382 598 ntBASIC14.55□□□□□ -0.08
Ercc3P49135 AA914427-201ENSMUST00000193194 1166 ntBASIC14.55□□□□□ -0.08
Ercc3P49135 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC14.55□□□□□ -0.08
Ercc3P49135 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC14.55□□□□□ -0.08
Ercc3P49135 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC14.55□□□□□ -0.08
Ercc3P49135 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC14.55□□□□□ -0.08
Ercc3P49135 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ercc3P49135 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ercc3P49135 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ercc3P49135 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Ercc3P49135 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ercc3P49135 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ercc3P49135 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ercc3P49135 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Ercc3P49135 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ercc3P49135 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ercc3P49135 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ercc3P49135 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ercc3P49135 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ercc3P49135 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC14.55□□□□□ -0.08
Ercc3P49135 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ercc3P49135 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ercc3P49135 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC14.55□□□□□ -0.08
Ercc3P49135 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ercc3P49135 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ercc3P49135 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ercc3P49135 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ercc3P49135 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ercc3P49135 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ercc3P49135 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC14.54□□□□□ -0.08
Ercc3P49135 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
Ercc3P49135 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ercc3P49135 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ercc3P49135 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Ercc3P49135 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Ercc3P49135 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ercc3P49135 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ercc3P49135 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ercc3P49135 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ercc3P49135 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC14.54□□□□□ -0.08
Ercc3P49135 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC14.54□□□□□ -0.08
Ercc3P49135 Gm44958-201ENSMUST00000203734 736 ntBASIC14.54□□□□□ -0.08
Ercc3P49135 Gm10312-201ENSMUST00000078515 489 ntBASIC14.54□□□□□ -0.08
Ercc3P49135 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Ercc3P49135 Crry-ps-201ENSMUST00000079090 1309 ntBASIC14.54□□□□□ -0.08
Ercc3P49135 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ercc3P49135 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ercc3P49135 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 99.2 ms