Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Brca1P48754 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Brca1P48754 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Brca1P48754 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Brca1P48754 Gm15374-201ENSMUST00000119313 844 ntBASIC13.52□□□□□ -0.25
Brca1P48754 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC13.52□□□□□ -0.25
Brca1P48754 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Brca1P48754 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Brca1P48754 Gm44953-201ENSMUST00000208745 1286 ntBASIC13.52□□□□□ -0.25
Brca1P48754 Gm18499-201ENSMUST00000220808 1021 ntBASIC13.52□□□□□ -0.25
Brca1P48754 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Brca1P48754 AC118639.2-201ENSMUST00000226289 223 ntBASIC13.52□□□□□ -0.25
Brca1P48754 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Brca1P48754 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Brca1P48754 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Brca1P48754 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Brca1P48754 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Brca1P48754 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Brca1P48754 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC13.52□□□□□ -0.25
Brca1P48754 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Brca1P48754 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Brca1P48754 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Brca1P48754 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Brca1P48754 AC166836.1-201ENSMUST00000219933 1795 ntBASIC13.51□□□□□ -0.25
Brca1P48754 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Brca1P48754 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Brca1P48754 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Brca1P48754 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Brca1P48754 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Brca1P48754 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Brca1P48754 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Brca1P48754 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Brca1P48754 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Brca1P48754 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Brca1P48754 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Brca1P48754 Gm22146-201ENSMUST00000157397 288 ntBASIC13.51□□□□□ -0.25
Brca1P48754 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Brca1P48754 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Brca1P48754 Gm29763-201ENSMUST00000205306 616 ntBASIC13.51□□□□□ -0.25
Brca1P48754 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Brca1P48754 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Brca1P48754 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Brca1P48754 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Brca1P48754 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Brca1P48754 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Brca1P48754 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Brca1P48754 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Brca1P48754 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Brca1P48754 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Brca1P48754 Gm43334-201ENSMUST00000197740 1318 ntBASIC13.51□□□□□ -0.25
Brca1P48754 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.51□□□□□ -0.25
Brca1P48754 Gm14441-201ENSMUST00000121960 540 ntBASIC13.5□□□□□ -0.25
Brca1P48754 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC13.5□□□□□ -0.25
Brca1P48754 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Brca1P48754 Gm19015-201ENSMUST00000184002 1189 ntBASIC13.5□□□□□ -0.25
Brca1P48754 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC13.5□□□□□ -0.25
Brca1P48754 Ighv1-60-201ENSMUST00000195816 405 ntBASIC13.5□□□□□ -0.25
Brca1P48754 Gm5870-201ENSMUST00000196461 282 ntBASIC13.5□□□□□ -0.25
Brca1P48754 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Brca1P48754 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC13.5□□□□□ -0.25
Brca1P48754 Gm6390-201ENSMUST00000215034 589 ntBASIC13.5□□□□□ -0.25
Brca1P48754 AC154361.2-201ENSMUST00000224747 943 ntBASIC13.5□□□□□ -0.25
Brca1P48754 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Brca1P48754 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Brca1P48754 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Brca1P48754 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Brca1P48754 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Brca1P48754 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Brca1P48754 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Brca1P48754 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Brca1P48754 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Brca1P48754 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Brca1P48754 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Brca1P48754 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Brca1P48754 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Brca1P48754 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Brca1P48754 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Brca1P48754 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Brca1P48754 Gm22594-201ENSMUST00000104251 130 ntBASIC13.5□□□□□ -0.25
Brca1P48754 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC13.5□□□□□ -0.25
Brca1P48754 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Brca1P48754 Gm44124-201ENSMUST00000204159 472 ntBASIC13.5□□□□□ -0.25
Brca1P48754 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Brca1P48754 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Brca1P48754 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Brca1P48754 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Brca1P48754 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.5□□□□□ -0.25
Brca1P48754 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Brca1P48754 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC13.5□□□□□ -0.25
Brca1P48754 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Brca1P48754 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Brca1P48754 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Brca1P48754 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Brca1P48754 Gm45199-201ENSMUST00000207640 1507 ntBASIC13.49□□□□□ -0.25
Brca1P48754 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Brca1P48754 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Brca1P48754 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Brca1P48754 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Brca1P48754 Gm21358-201ENSMUST00000191645 1659 ntBASIC13.49□□□□□ -0.25
Brca1P48754 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms