Protein–RNA interactions for Protein: P48281

Vdr, Vitamin D3 receptor, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VdrP48281 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VdrP48281 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.53□□□□□ -0.4
VdrP48281 Gm15824-201ENSMUST00000119516 955 ntBASIC12.53□□□□□ -0.4
VdrP48281 Gm13829-201ENSMUST00000119600 138 ntBASIC12.53□□□□□ -0.4
VdrP48281 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.53□□□□□ -0.4
VdrP48281 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.53□□□□□ -0.4
VdrP48281 Gm17208-201ENSMUST00000168388 535 ntBASIC12.53□□□□□ -0.4
VdrP48281 Gm6098-201ENSMUST00000180234 330 ntBASIC12.53□□□□□ -0.4
VdrP48281 Gm8602-201ENSMUST00000184045 607 ntBASIC12.53□□□□□ -0.4
VdrP48281 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.53□□□□□ -0.4
VdrP48281 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.53□□□□□ -0.4
VdrP48281 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.53□□□□□ -0.4
VdrP48281 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.53□□□□□ -0.4
VdrP48281 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.53□□□□□ -0.4
VdrP48281 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VdrP48281 4930550C14Rik-204ENSMUST00000217318 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
VdrP48281 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.53□□□□□ -0.4
VdrP48281 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.53□□□□□ -0.4
VdrP48281 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.53□□□□□ -0.4
VdrP48281 Gm8598-201ENSMUST00000221184 836 ntBASIC12.53□□□□□ -0.4
VdrP48281 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VdrP48281 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
VdrP48281 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
VdrP48281 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VdrP48281 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VdrP48281 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VdrP48281 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
VdrP48281 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
VdrP48281 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
VdrP48281 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.53□□□□□ -0.4
VdrP48281 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VdrP48281 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VdrP48281 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
VdrP48281 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VdrP48281 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
VdrP48281 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VdrP48281 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VdrP48281 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VdrP48281 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
VdrP48281 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
VdrP48281 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
VdrP48281 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
VdrP48281 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.52□□□□□ -0.4
VdrP48281 Olfr282-204ENSMUST00000215320 1573 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
VdrP48281 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
VdrP48281 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.4
VdrP48281 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
VdrP48281 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
VdrP48281 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
VdrP48281 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VdrP48281 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
VdrP48281 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VdrP48281 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VdrP48281 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
VdrP48281 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.52□□□□□ -0.41
VdrP48281 Gm26185-201ENSMUST00000157692 266 ntBASIC12.52□□□□□ -0.41
VdrP48281 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC12.52□□□□□ -0.41
VdrP48281 Gm42599-201ENSMUST00000201308 469 ntBASIC12.52□□□□□ -0.41
VdrP48281 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.52□□□□□ -0.41
VdrP48281 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VdrP48281 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VdrP48281 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.52□□□□□ -0.41
VdrP48281 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VdrP48281 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
VdrP48281 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
VdrP48281 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
VdrP48281 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VdrP48281 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VdrP48281 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
VdrP48281 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
VdrP48281 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VdrP48281 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VdrP48281 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VdrP48281 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
VdrP48281 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.52□□□□□ -0.41
VdrP48281 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
VdrP48281 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VdrP48281 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
VdrP48281 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
VdrP48281 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VdrP48281 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VdrP48281 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.51□□□□□ -0.41
VdrP48281 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
VdrP48281 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
VdrP48281 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.51□□□□□ -0.41
VdrP48281 Gm9877-201ENSMUST00000064271 2627 ntBASIC12.51□□□□□ -0.41
VdrP48281 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
VdrP48281 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.51□□□□□ -0.41
VdrP48281 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
VdrP48281 Gm15703-201ENSMUST00000120250 880 ntBASIC12.51□□□□□ -0.41
VdrP48281 Proscos-202ENSMUST00000178990 666 ntBASIC12.51□□□□□ -0.41
VdrP48281 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
VdrP48281 Gm37042-201ENSMUST00000193816 581 ntBASIC12.51□□□□□ -0.41
VdrP48281 Gm37922-201ENSMUST00000195596 455 ntBASIC12.51□□□□□ -0.41
VdrP48281 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VdrP48281 Gm8463-201ENSMUST00000208573 613 ntBASIC12.51□□□□□ -0.41
VdrP48281 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.51□□□□□ -0.41
VdrP48281 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.51□□□□□ -0.41
VdrP48281 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VdrP48281 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms