Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vps4bP46467 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Vps4bP46467 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vps4bP46467 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Vps4bP46467 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.46□□□□□ -0.42
Vps4bP46467 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Vps4bP46467 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vps4bP46467 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.46□□□□□ -0.42
Vps4bP46467 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.46□□□□□ -0.42
Vps4bP46467 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vps4bP46467 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
Vps4bP46467 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vps4bP46467 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vps4bP46467 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Vps4bP46467 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.42
Vps4bP46467 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
Vps4bP46467 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vps4bP46467 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps4bP46467 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Vps4bP46467 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps4bP46467 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps4bP46467 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps4bP46467 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps4bP46467 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Vps4bP46467 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Vps4bP46467 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Vps4bP46467 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps4bP46467 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.45□□□□□ -0.42
Vps4bP46467 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Vps4bP46467 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps4bP46467 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps4bP46467 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Vps4bP46467 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps4bP46467 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps4bP46467 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Vps4bP46467 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.45□□□□□ -0.42
Vps4bP46467 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Vps4bP46467 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.45□□□□□ -0.42
Vps4bP46467 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Vps4bP46467 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.45□□□□□ -0.42
Vps4bP46467 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.45□□□□□ -0.42
Vps4bP46467 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.45□□□□□ -0.42
Vps4bP46467 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps4bP46467 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps4bP46467 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps4bP46467 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps4bP46467 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps4bP46467 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Vps4bP46467 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps4bP46467 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Vps4bP46467 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Vps4bP46467 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps4bP46467 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps4bP46467 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Vps4bP46467 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Vps4bP46467 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps4bP46467 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Vps4bP46467 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps4bP46467 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps4bP46467 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps4bP46467 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.44□□□□□ -0.42
Vps4bP46467 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.44□□□□□ -0.42
Vps4bP46467 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.44□□□□□ -0.42
Vps4bP46467 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Vps4bP46467 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.44□□□□□ -0.42
Vps4bP46467 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vps4bP46467 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Vps4bP46467 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps4bP46467 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps4bP46467 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps4bP46467 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps4bP46467 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Vps4bP46467 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps4bP46467 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Vps4bP46467 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps4bP46467 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vps4bP46467 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.44□□□□□ -0.42
Vps4bP46467 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.44□□□□□ -0.42
Vps4bP46467 Gm25927-201ENSMUST00000175058 117 ntBASIC12.44□□□□□ -0.42
Vps4bP46467 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.44□□□□□ -0.42
Vps4bP46467 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.44□□□□□ -0.42
Vps4bP46467 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.44□□□□□ -0.42
Vps4bP46467 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vps4bP46467 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vps4bP46467 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.44□□□□□ -0.42
Vps4bP46467 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.44□□□□□ -0.42
Vps4bP46467 Gm10076-201ENSMUST00000073238 384 ntBASIC12.44□□□□□ -0.42
Vps4bP46467 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vps4bP46467 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps4bP46467 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps4bP46467 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps4bP46467 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vps4bP46467 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps4bP46467 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps4bP46467 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps4bP46467 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.44□□□□□ -0.42
Vps4bP46467 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps4bP46467 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps4bP46467 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.44□□□□□ -0.42
Vps4bP46467 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms