Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Tnfsf4P43488 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.82□□□□□ -0.52
Tnfsf4P43488 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC11.82□□□□□ -0.52
Tnfsf4P43488 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.82□□□□□ -0.52
Tnfsf4P43488 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC11.82□□□□□ -0.52
Tnfsf4P43488 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfsf4P43488 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.82□□□□□ -0.52
Tnfsf4P43488 Gm43818-201ENSMUST00000200605 466 ntBASIC11.82□□□□□ -0.52
Tnfsf4P43488 Gm44958-201ENSMUST00000203734 736 ntBASIC11.82□□□□□ -0.52
Tnfsf4P43488 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.82□□□□□ -0.52
Tnfsf4P43488 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.82□□□□□ -0.52
Tnfsf4P43488 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.82□□□□□ -0.52
Tnfsf4P43488 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.82□□□□□ -0.52
Tnfsf4P43488 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfsf4P43488 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Tnfsf4P43488 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Tnfsf4P43488 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfsf4P43488 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.82□□□□□ -0.52
Tnfsf4P43488 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfsf4P43488 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfsf4P43488 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfsf4P43488 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfsf4P43488 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfsf4P43488 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfsf4P43488 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfsf4P43488 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfsf4P43488 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfsf4P43488 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfsf4P43488 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfsf4P43488 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfsf4P43488 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfsf4P43488 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfsf4P43488 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfsf4P43488 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfsf4P43488 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfsf4P43488 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfsf4P43488 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfsf4P43488 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Tnfsf4P43488 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Tnfsf4P43488 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfsf4P43488 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Tnfsf4P43488 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.81□□□□□ -0.52
Tnfsf4P43488 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfsf4P43488 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Tnfsf4P43488 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfsf4P43488 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.81□□□□□ -0.52
Tnfsf4P43488 Gm13736-201ENSMUST00000119272 253 ntBASIC11.81□□□□□ -0.52
Tnfsf4P43488 Gm11591-201ENSMUST00000120063 702 ntBASIC11.81□□□□□ -0.52
Tnfsf4P43488 Gm8738-201ENSMUST00000172606 329 ntBASIC11.81□□□□□ -0.52
Tnfsf4P43488 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfsf4P43488 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfsf4P43488 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.81□□□□□ -0.52
Tnfsf4P43488 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfsf4P43488 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfsf4P43488 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfsf4P43488 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.81□□□□□ -0.52
Tnfsf4P43488 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfsf4P43488 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Tnfsf4P43488 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfsf4P43488 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.81□□□□□ -0.52
Tnfsf4P43488 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfsf4P43488 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfsf4P43488 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfsf4P43488 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.81□□□□□ -0.52
Tnfsf4P43488 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.81□□□□□ -0.52
Tnfsf4P43488 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfsf4P43488 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfsf4P43488 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.81□□□□□ -0.52
Tnfsf4P43488 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfsf4P43488 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfsf4P43488 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfsf4P43488 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfsf4P43488 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfsf4P43488 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfsf4P43488 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfsf4P43488 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Tnfsf4P43488 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsf4P43488 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsf4P43488 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsf4P43488 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsf4P43488 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Tnfsf4P43488 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsf4P43488 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.8□□□□□ -0.52
Tnfsf4P43488 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Tnfsf4P43488 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsf4P43488 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsf4P43488 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsf4P43488 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsf4P43488 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsf4P43488 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Tnfsf4P43488 Gm11478-201ENSMUST00000117851 599 ntBASIC11.8□□□□□ -0.52
Tnfsf4P43488 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.8□□□□□ -0.52
Tnfsf4P43488 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsf4P43488 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.8□□□□□ -0.52
Tnfsf4P43488 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.8□□□□□ -0.52
Tnfsf4P43488 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.8□□□□□ -0.52
Tnfsf4P43488 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsf4P43488 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsf4P43488 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsf4P43488 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms