Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox6P40645 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox6P40645 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox6P40645 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.54□□□□□ -0.56
Sox6P40645 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Sox6P40645 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox6P40645 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox6P40645 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox6P40645 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox6P40645 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox6P40645 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox6P40645 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox6P40645 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.53□□□□□ -0.56
Sox6P40645 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sox6P40645 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox6P40645 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox6P40645 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox6P40645 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox6P40645 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox6P40645 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sox6P40645 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox6P40645 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox6P40645 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox6P40645 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.53□□□□□ -0.56
Sox6P40645 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.53□□□□□ -0.56
Sox6P40645 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC11.53□□□□□ -0.56
Sox6P40645 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Sox6P40645 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox6P40645 Gm25927-201ENSMUST00000175058 117 ntBASIC11.53□□□□□ -0.56
Sox6P40645 Gm8099-201ENSMUST00000200510 742 ntBASIC11.53□□□□□ -0.56
Sox6P40645 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox6P40645 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox6P40645 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Sox6P40645 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox6P40645 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox6P40645 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox6P40645 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sox6P40645 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Sox6P40645 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Sox6P40645 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sox6P40645 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sox6P40645 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.52□□□□□ -0.56
Sox6P40645 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Sox6P40645 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.52□□□□□ -0.56
Sox6P40645 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sox6P40645 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sox6P40645 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sox6P40645 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sox6P40645 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Sox6P40645 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sox6P40645 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox6P40645 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox6P40645 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox6P40645 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox6P40645 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox6P40645 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Sox6P40645 Gm14704-201ENSMUST00000120300 874 ntBASIC11.52□□□□□ -0.57
Sox6P40645 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sox6P40645 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sox6P40645 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.52□□□□□ -0.57
Sox6P40645 Gm7029-201ENSMUST00000173226 450 ntBASIC11.52□□□□□ -0.57
Sox6P40645 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.52□□□□□ -0.57
Sox6P40645 AC153962.4-201ENSMUST00000217878 242 ntBASIC11.52□□□□□ -0.57
Sox6P40645 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.52□□□□□ -0.57
Sox6P40645 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox6P40645 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC11.52□□□□□ -0.57
Sox6P40645 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox6P40645 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox6P40645 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox6P40645 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Sox6P40645 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sox6P40645 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.52□□□□□ -0.57
Sox6P40645 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox6P40645 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox6P40645 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.52□□□□□ -0.57
Sox6P40645 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox6P40645 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox6P40645 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sox6P40645 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sox6P40645 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Sox6P40645 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sox6P40645 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox6P40645 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox6P40645 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.52□□□□□ -0.57
Sox6P40645 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.52□□□□□ -0.57
Sox6P40645 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sox6P40645 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox6P40645 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox6P40645 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox6P40645 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sox6P40645 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.51□□□□□ -0.57
Sox6P40645 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox6P40645 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Sox6P40645 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox6P40645 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sox6P40645 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.51□□□□□ -0.57
Sox6P40645 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.51□□□□□ -0.57
Sox6P40645 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
Sox6P40645 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.51□□□□□ -0.57
Sox6P40645 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms