Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Chd1P40201 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chd1P40201 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chd1P40201 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Chd1P40201 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chd1P40201 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Chd1P40201 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chd1P40201 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Chd1P40201 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Chd1P40201 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC17.95■□□□□ 0.46
Chd1P40201 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Chd1P40201 Nup188-202ENSMUST00000113634 534 ntTSL 2 BASIC17.95■□□□□ 0.46
Chd1P40201 Gm15815-201ENSMUST00000120569 255 ntBASIC17.95■□□□□ 0.46
Chd1P40201 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Chd1P40201 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chd1P40201 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Chd1P40201 AC187103.3-201ENSMUST00000225725 646 ntBASIC17.95■□□□□ 0.46
Chd1P40201 Tex46-201ENSMUST00000046647 683 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chd1P40201 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC17.95■□□□□ 0.46
Chd1P40201 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chd1P40201 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chd1P40201 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Chd1P40201 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chd1P40201 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Chd1P40201 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Chd1P40201 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Chd1P40201 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chd1P40201 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Chd1P40201 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chd1P40201 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Chd1P40201 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.94■□□□□ 0.46
Chd1P40201 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC17.94■□□□□ 0.46
Chd1P40201 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Chd1P40201 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC17.94■□□□□ 0.46
Chd1P40201 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chd1P40201 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Chd1P40201 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Chd1P40201 Itgb1bp1-202ENSMUST00000172834 801 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Chd1P40201 Gm25872-201ENSMUST00000177784 100 ntBASIC17.94■□□□□ 0.46
Chd1P40201 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC17.94■□□□□ 0.46
Chd1P40201 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Chd1P40201 Gm43547-201ENSMUST00000197729 328 ntBASIC17.94■□□□□ 0.46
Chd1P40201 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Chd1P40201 Gm8255-201ENSMUST00000218693 305 ntBASIC17.94■□□□□ 0.46
Chd1P40201 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Chd1P40201 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chd1P40201 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC17.94■□□□□ 0.46
Chd1P40201 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chd1P40201 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chd1P40201 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chd1P40201 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chd1P40201 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC17.93■□□□□ 0.46
Chd1P40201 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chd1P40201 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chd1P40201 Gm23595-201ENSMUST00000104306 130 ntBASIC17.93■□□□□ 0.46
Chd1P40201 Gm8152-201ENSMUST00000120842 637 ntBASIC17.93■□□□□ 0.46
Chd1P40201 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC17.93■□□□□ 0.46
Chd1P40201 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Chd1P40201 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Chd1P40201 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC17.93■□□□□ 0.46
Chd1P40201 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC17.93■□□□□ 0.46
Chd1P40201 Gzmk-201ENSMUST00000038212 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chd1P40201 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Chd1P40201 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chd1P40201 AC165351.1-201ENSMUST00000219078 2020 ntBASIC17.93■□□□□ 0.46
Chd1P40201 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Chd1P40201 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Chd1P40201 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chd1P40201 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC17.93■□□□□ 0.46
Chd1P40201 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chd1P40201 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chd1P40201 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Chd1P40201 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chd1P40201 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chd1P40201 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
Chd1P40201 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Chd1P40201 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Chd1P40201 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chd1P40201 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Chd1P40201 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC17.92■□□□□ 0.46
Chd1P40201 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC17.92■□□□□ 0.46
Chd1P40201 Gm43564-201ENSMUST00000196185 211 ntBASIC17.92■□□□□ 0.46
Chd1P40201 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC17.92■□□□□ 0.46
Chd1P40201 CT030170.2-201ENSMUST00000223267 126 ntBASIC17.92■□□□□ 0.46
Chd1P40201 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chd1P40201 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chd1P40201 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Chd1P40201 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chd1P40201 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chd1P40201 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Chd1P40201 Rnf17-202ENSMUST00000223627 2077 ntBASIC17.92■□□□□ 0.46
Chd1P40201 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Chd1P40201 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Chd1P40201 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chd1P40201 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Chd1P40201 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC17.92■□□□□ 0.46
Chd1P40201 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chd1P40201 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chd1P40201 Il33-201ENSMUST00000025724 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chd1P40201 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms