Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Upk2P38575 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Upk2P38575 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Upk2P38575 AC154517.2-201ENSMUST00000220829 2458 ntBASIC10.75□□□□□ -0.69
Upk2P38575 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Upk2P38575 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Upk2P38575 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC10.75□□□□□ -0.69
Upk2P38575 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Upk2P38575 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Upk2P38575 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Upk2P38575 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Upk2P38575 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC10.74□□□□□ -0.69
Upk2P38575 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Upk2P38575 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Upk2P38575 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC10.74□□□□□ -0.69
Upk2P38575 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Upk2P38575 Pck2-205ENSMUST00000226352 2784 ntBASIC10.74□□□□□ -0.69
Upk2P38575 AC130671.2-201ENSMUST00000227224 1621 ntBASIC10.74□□□□□ -0.69
Upk2P38575 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Upk2P38575 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Upk2P38575 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Upk2P38575 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Upk2P38575 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC10.74□□□□□ -0.69
Upk2P38575 Gm25214-201ENSMUST00000104573 129 ntBASIC10.74□□□□□ -0.69
Upk2P38575 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Upk2P38575 Gm15370-201ENSMUST00000117158 253 ntBASIC10.74□□□□□ -0.69
Upk2P38575 Gm13392-201ENSMUST00000117708 150 ntBASIC10.74□□□□□ -0.69
Upk2P38575 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Upk2P38575 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Upk2P38575 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Upk2P38575 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Upk2P38575 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Upk2P38575 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC10.74□□□□□ -0.69
Upk2P38575 AC113031.8-201ENSMUST00000227856 631 ntBASIC10.74□□□□□ -0.69
Upk2P38575 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Upk2P38575 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Upk2P38575 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Upk2P38575 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC10.74□□□□□ -0.69
Upk2P38575 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Upk2P38575 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Upk2P38575 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Upk2P38575 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Upk2P38575 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Upk2P38575 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC10.74□□□□□ -0.69
Upk2P38575 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Upk2P38575 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Upk2P38575 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Upk2P38575 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Upk2P38575 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC10.74□□□□□ -0.69
Upk2P38575 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Upk2P38575 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC10.74□□□□□ -0.69
Upk2P38575 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Upk2P38575 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Upk2P38575 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Upk2P38575 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Upk2P38575 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Upk2P38575 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Upk2P38575 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Upk2P38575 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Upk2P38575 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Upk2P38575 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Upk2P38575 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC10.73□□□□□ -0.69
Upk2P38575 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Upk2P38575 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Upk2P38575 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Upk2P38575 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Upk2P38575 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC10.73□□□□□ -0.69
Upk2P38575 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Upk2P38575 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Upk2P38575 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC10.73□□□□□ -0.69
Upk2P38575 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC10.73□□□□□ -0.69
Upk2P38575 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Upk2P38575 Gm26956-201ENSMUST00000182176 986 ntBASIC10.73□□□□□ -0.69
Upk2P38575 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC10.73□□□□□ -0.69
Upk2P38575 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC10.73□□□□□ -0.69
Upk2P38575 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC10.73□□□□□ -0.69
Upk2P38575 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC10.73□□□□□ -0.69
Upk2P38575 Gm18935-201ENSMUST00000212692 664 ntBASIC10.73□□□□□ -0.69
Upk2P38575 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC10.73□□□□□ -0.69
Upk2P38575 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Upk2P38575 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Upk2P38575 Gm9996-201ENSMUST00000070359 913 ntBASIC10.73□□□□□ -0.69
Upk2P38575 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Upk2P38575 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Upk2P38575 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Upk2P38575 AC166574.4-201ENSMUST00000227165 1937 ntBASIC10.73□□□□□ -0.69
Upk2P38575 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Upk2P38575 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Upk2P38575 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Upk2P38575 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Upk2P38575 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Upk2P38575 Gm7537-201ENSMUST00000221660 1414 ntBASIC10.73□□□□□ -0.69
Upk2P38575 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Upk2P38575 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Upk2P38575 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Upk2P38575 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Upk2P38575 Gm4864-201ENSMUST00000219894 1461 ntBASIC10.73□□□□□ -0.69
Upk2P38575 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Upk2P38575 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Upk2P38575 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms