Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Gm24830-201ENSMUST00000102024 166 ntBASIC13.37□□□□□ -0.27
Sox5P35710 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox5P35710 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.37□□□□□ -0.27
Sox5P35710 Gm13342-201ENSMUST00000121055 207 ntBASIC13.37□□□□□ -0.27
Sox5P35710 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sox5P35710 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox5P35710 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sox5P35710 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC13.37□□□□□ -0.27
Sox5P35710 Gm8738-201ENSMUST00000172606 329 ntBASIC13.37□□□□□ -0.27
Sox5P35710 Gm29127-201ENSMUST00000188304 517 ntBASIC13.37□□□□□ -0.27
Sox5P35710 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sox5P35710 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.37□□□□□ -0.27
Sox5P35710 AC126253.1-202ENSMUST00000226732 835 ntBASIC13.37□□□□□ -0.27
Sox5P35710 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox5P35710 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox5P35710 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sox5P35710 Gm10076-201ENSMUST00000073238 384 ntBASIC13.37□□□□□ -0.27
Sox5P35710 Gm26232-201ENSMUST00000083360 166 ntBASIC13.37□□□□□ -0.27
Sox5P35710 Rnu1b6-201ENSMUST00000083839 166 ntBASIC13.37□□□□□ -0.27
Sox5P35710 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox5P35710 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox5P35710 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sox5P35710 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox5P35710 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sox5P35710 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sox5P35710 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox5P35710 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox5P35710 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC13.37□□□□□ -0.27
Sox5P35710 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox5P35710 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox5P35710 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Sox5P35710 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Sox5P35710 Gm37648-201ENSMUST00000192072 2563 ntBASIC13.36□□□□□ -0.27
Sox5P35710 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox5P35710 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox5P35710 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Sox5P35710 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
Sox5P35710 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC13.36□□□□□ -0.27
Sox5P35710 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC13.36□□□□□ -0.27
Sox5P35710 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Sox5P35710 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox5P35710 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox5P35710 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Sox5P35710 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Sox5P35710 Gm12490-201ENSMUST00000120255 560 ntBASIC13.36□□□□□ -0.27
Sox5P35710 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC13.36□□□□□ -0.27
Sox5P35710 Gm6222-202ENSMUST00000182143 629 ntBASIC13.36□□□□□ -0.27
Sox5P35710 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC13.36□□□□□ -0.27
Sox5P35710 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.36□□□□□ -0.27
Sox5P35710 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.36□□□□□ -0.27
Sox5P35710 Gm5904-201ENSMUST00000210286 865 ntBASIC13.36□□□□□ -0.27
Sox5P35710 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox5P35710 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox5P35710 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox5P35710 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox5P35710 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox5P35710 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Sox5P35710 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox5P35710 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox5P35710 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox5P35710 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Sox5P35710 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox5P35710 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Sox5P35710 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox5P35710 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sox5P35710 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox5P35710 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Sox5P35710 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox5P35710 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox5P35710 Gm37849-201ENSMUST00000194722 1881 ntBASIC13.36□□□□□ -0.27
Sox5P35710 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox5P35710 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sox5P35710 Gm43760-201ENSMUST00000202120 3015 ntBASIC13.35□□□□□ -0.27
Sox5P35710 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox5P35710 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Sox5P35710 Gm43061-201ENSMUST00000198850 2241 ntBASIC13.35□□□□□ -0.27
Sox5P35710 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox5P35710 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC13.35□□□□□ -0.27
Sox5P35710 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC13.35□□□□□ -0.27
Sox5P35710 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC13.35□□□□□ -0.27
Sox5P35710 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sox5P35710 AC093022.4-203ENSMUST00000228523 2657 ntBASIC13.35□□□□□ -0.27
Sox5P35710 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Sox5P35710 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sox5P35710 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sox5P35710 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox5P35710 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox5P35710 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox5P35710 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox5P35710 AC108858.2-201ENSMUST00000228186 1425 ntBASIC13.35□□□□□ -0.27
Sox5P35710 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox5P35710 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.35□□□□□ -0.27
Sox5P35710 Gm43417-201ENSMUST00000201586 5207 ntBASIC13.35□□□□□ -0.27
Sox5P35710 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox5P35710 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sox5P35710 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sox5P35710 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox5P35710 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Sox5P35710 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox5P35710 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms