Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Gm43133-201ENSMUST00000197472 463 ntBASIC12.56□□□□□ -0.4
Mmp13P33435 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.56□□□□□ -0.4
Mmp13P33435 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.56□□□□□ -0.4
Mmp13P33435 Gm18584-201ENSMUST00000203098 964 ntBASIC12.56□□□□□ -0.4
Mmp13P33435 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp13P33435 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.56□□□□□ -0.4
Mmp13P33435 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp13P33435 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.56□□□□□ -0.4
Mmp13P33435 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.56□□□□□ -0.4
Mmp13P33435 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.56□□□□□ -0.4
Mmp13P33435 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.56□□□□□ -0.4
Mmp13P33435 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp13P33435 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp13P33435 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Mmp13P33435 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp13P33435 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp13P33435 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.56□□□□□ -0.4
Mmp13P33435 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.56□□□□□ -0.4
Mmp13P33435 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp13P33435 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.56□□□□□ -0.4
Mmp13P33435 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp13P33435 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Mmp13P33435 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp13P33435 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp13P33435 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Mmp13P33435 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp13P33435 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp13P33435 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.56□□□□□ -0.4
Mmp13P33435 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.56□□□□□ -0.4
Mmp13P33435 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.56□□□□□ -0.4
Mmp13P33435 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Mmp13P33435 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Mmp13P33435 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Mmp13P33435 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Mmp13P33435 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.55□□□□□ -0.4
Mmp13P33435 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Mmp13P33435 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.55□□□□□ -0.4
Mmp13P33435 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Mmp13P33435 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Mmp13P33435 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Mmp13P33435 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Mmp13P33435 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Mmp13P33435 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Mmp13P33435 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.55□□□□□ -0.4
Mmp13P33435 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Mmp13P33435 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.55□□□□□ -0.4
Mmp13P33435 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.55□□□□□ -0.4
Mmp13P33435 Gm7809-201ENSMUST00000153199 742 ntBASIC12.55□□□□□ -0.4
Mmp13P33435 Rmrp-201ENSMUST00000157463 271 ntBASIC12.55□□□□□ -0.4
Mmp13P33435 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.55□□□□□ -0.4
Mmp13P33435 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.55□□□□□ -0.4
Mmp13P33435 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.55□□□□□ -0.4
Mmp13P33435 Gm38092-201ENSMUST00000195600 653 ntBASIC12.55□□□□□ -0.4
Mmp13P33435 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Mmp13P33435 Gm45331-201ENSMUST00000209868 554 ntBASIC12.55□□□□□ -0.4
Mmp13P33435 Gm19309-201ENSMUST00000218295 205 ntBASIC12.55□□□□□ -0.4
Mmp13P33435 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Mmp13P33435 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.55□□□□□ -0.4
Mmp13P33435 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Mmp13P33435 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Mmp13P33435 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Mmp13P33435 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Mmp13P33435 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Mmp13P33435 Cog3-203ENSMUST00000227473 4197 ntBASIC12.55□□□□□ -0.4
Mmp13P33435 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Mmp13P33435 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.55□□□□□ -0.4
Mmp13P33435 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Mmp13P33435 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Mmp13P33435 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Mmp13P33435 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Mmp13P33435 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Mmp13P33435 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mmp13P33435 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.54□□□□□ -0.4
Mmp13P33435 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mmp13P33435 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Mmp13P33435 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.54□□□□□ -0.4
Mmp13P33435 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mmp13P33435 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Mmp13P33435 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Mmp13P33435 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Mmp13P33435 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mmp13P33435 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mmp13P33435 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Mmp13P33435 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mmp13P33435 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Mmp13P33435 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Mmp13P33435 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Mmp13P33435 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Mmp13P33435 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mmp13P33435 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mmp13P33435 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mmp13P33435 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mmp13P33435 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.54□□□□□ -0.4
Mmp13P33435 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Mmp13P33435 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.54□□□□□ -0.4
Mmp13P33435 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mmp13P33435 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mmp13P33435 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Mmp13P33435 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Mmp13P33435 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms