Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC10.57□□□□□ -0.72
Slc6a1P31648 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Slc6a1P31648 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC10.57□□□□□ -0.72
Slc6a1P31648 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC10.57□□□□□ -0.72
Slc6a1P31648 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Slc6a1P31648 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC10.57□□□□□ -0.72
Slc6a1P31648 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Slc6a1P31648 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Slc6a1P31648 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Slc6a1P31648 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC10.57□□□□□ -0.72
Slc6a1P31648 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Slc6a1P31648 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC10.57□□□□□ -0.72
Slc6a1P31648 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Slc6a1P31648 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Slc6a1P31648 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Slc6a1P31648 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Slc6a1P31648 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Slc6a1P31648 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Slc6a1P31648 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Slc6a1P31648 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Slc6a1P31648 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Slc6a1P31648 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC10.56□□□□□ -0.72
Slc6a1P31648 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Slc6a1P31648 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Slc6a1P31648 AC131586.1-201ENSMUST00000228844 2964 ntBASIC10.56□□□□□ -0.72
Slc6a1P31648 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Slc6a1P31648 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Slc6a1P31648 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Slc6a1P31648 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Slc6a1P31648 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Slc6a1P31648 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Slc6a1P31648 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Slc6a1P31648 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Slc6a1P31648 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Slc6a1P31648 Gm9466-201ENSMUST00000218144 2246 ntBASIC10.56□□□□□ -0.72
Slc6a1P31648 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Slc6a1P31648 Gm17230-201ENSMUST00000171194 3942 ntBASIC10.56□□□□□ -0.72
Slc6a1P31648 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Slc6a1P31648 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Slc6a1P31648 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Slc6a1P31648 Gm14127-201ENSMUST00000117906 678 ntBASIC10.56□□□□□ -0.72
Slc6a1P31648 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC10.56□□□□□ -0.72
Slc6a1P31648 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Slc6a1P31648 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Slc6a1P31648 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC10.56□□□□□ -0.72
Slc6a1P31648 Gm27892-201ENSMUST00000185017 106 ntBASIC10.56□□□□□ -0.72
Slc6a1P31648 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Slc6a1P31648 Gm38297-201ENSMUST00000195122 1057 ntBASIC10.56□□□□□ -0.72
Slc6a1P31648 Gm45059-201ENSMUST00000205558 1077 ntBASIC10.56□□□□□ -0.72
Slc6a1P31648 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Slc6a1P31648 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Slc6a1P31648 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Slc6a1P31648 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Slc6a1P31648 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Slc6a1P31648 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Slc6a1P31648 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Slc6a1P31648 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Slc6a1P31648 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Slc6a1P31648 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Slc6a1P31648 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Slc6a1P31648 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Slc6a1P31648 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
Slc6a1P31648 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC10.56□□□□□ -0.72
Slc6a1P31648 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Slc6a1P31648 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Slc6a1P31648 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Slc6a1P31648 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Slc6a1P31648 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Slc6a1P31648 Gm43760-201ENSMUST00000202120 3015 ntBASIC10.55□□□□□ -0.72
Slc6a1P31648 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Slc6a1P31648 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Slc6a1P31648 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Slc6a1P31648 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Slc6a1P31648 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Slc6a1P31648 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Slc6a1P31648 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC10.55□□□□□ -0.72
Slc6a1P31648 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Slc6a1P31648 Gm8038-201ENSMUST00000164674 2044 ntBASIC10.55□□□□□ -0.72
Slc6a1P31648 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Slc6a1P31648 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Slc6a1P31648 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Slc6a1P31648 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Slc6a1P31648 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC10.55□□□□□ -0.72
Slc6a1P31648 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Slc6a1P31648 Gm4984-201ENSMUST00000115987 360 ntBASIC10.55□□□□□ -0.72
Slc6a1P31648 Gm12485-201ENSMUST00000119641 291 ntBASIC10.55□□□□□ -0.72
Slc6a1P31648 Gm12416-201ENSMUST00000120911 1008 ntBASIC10.55□□□□□ -0.72
Slc6a1P31648 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Slc6a1P31648 Gm12138-201ENSMUST00000122180 951 ntBASIC10.55□□□□□ -0.72
Slc6a1P31648 Gm26464-201ENSMUST00000157094 305 ntBASIC10.55□□□□□ -0.72
Slc6a1P31648 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Slc6a1P31648 Gm38223-201ENSMUST00000194484 695 ntBASIC10.55□□□□□ -0.72
Slc6a1P31648 Gm43094-201ENSMUST00000196549 921 ntBASIC10.55□□□□□ -0.72
Slc6a1P31648 Gm18062-201ENSMUST00000208020 547 ntBASIC10.55□□□□□ -0.72
Slc6a1P31648 Gm18055-201ENSMUST00000208254 547 ntBASIC10.55□□□□□ -0.72
Slc6a1P31648 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC10.55□□□□□ -0.72
Slc6a1P31648 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC10.55□□□□□ -0.72
Slc6a1P31648 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC10.55□□□□□ -0.72
Slc6a1P31648 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC10.55□□□□□ -0.72
Slc6a1P31648 Gm7446-201ENSMUST00000221035 1240 ntBASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms