Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col2a1P28481 Snora73b-201ENSMUST00000083419 205 ntBASIC13.74□□□□□ -0.21
Col2a1P28481 Gm5879-201ENSMUST00000089501 1209 ntBASIC13.74□□□□□ -0.21
Col2a1P28481 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Col2a1P28481 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col2a1P28481 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col2a1P28481 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Col2a1P28481 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col2a1P28481 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col2a1P28481 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Col2a1P28481 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col2a1P28481 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Col2a1P28481 Gm18983-201ENSMUST00000222884 2729 ntBASIC13.74□□□□□ -0.21
Col2a1P28481 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.74□□□□□ -0.21
Col2a1P28481 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Col2a1P28481 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.74□□□□□ -0.21
Col2a1P28481 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col2a1P28481 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Col2a1P28481 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col2a1P28481 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Col2a1P28481 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col2a1P28481 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
Col2a1P28481 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC13.74□□□□□ -0.21
Col2a1P28481 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Col2a1P28481 Gm16071-201ENSMUST00000119589 793 ntBASIC13.74□□□□□ -0.21
Col2a1P28481 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Col2a1P28481 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col2a1P28481 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Col2a1P28481 Gm17826-201ENSMUST00000189720 798 ntBASIC13.74□□□□□ -0.21
Col2a1P28481 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC13.74□□□□□ -0.21
Col2a1P28481 Gm2517-201ENSMUST00000215651 348 ntBASIC13.74□□□□□ -0.21
Col2a1P28481 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col2a1P28481 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC13.74□□□□□ -0.21
Col2a1P28481 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.73□□□□□ -0.21
Col2a1P28481 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col2a1P28481 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col2a1P28481 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Col2a1P28481 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col2a1P28481 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col2a1P28481 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col2a1P28481 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col2a1P28481 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col2a1P28481 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col2a1P28481 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC13.73□□□□□ -0.21
Col2a1P28481 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.73□□□□□ -0.21
Col2a1P28481 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.73□□□□□ -0.21
Col2a1P28481 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col2a1P28481 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
Col2a1P28481 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Col2a1P28481 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC13.73□□□□□ -0.21
Col2a1P28481 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col2a1P28481 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC13.73□□□□□ -0.21
Col2a1P28481 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC13.73□□□□□ -0.21
Col2a1P28481 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC13.73□□□□□ -0.21
Col2a1P28481 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col2a1P28481 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Col2a1P28481 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Col2a1P28481 Gm23771-201ENSMUST00000178702 110 ntBASIC13.73□□□□□ -0.21
Col2a1P28481 Gm4654-201ENSMUST00000183305 982 ntBASIC13.73□□□□□ -0.21
Col2a1P28481 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC13.73□□□□□ -0.21
Col2a1P28481 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC13.73□□□□□ -0.21
Col2a1P28481 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC13.73□□□□□ -0.21
Col2a1P28481 Gm10752-201ENSMUST00000218348 729 ntBASIC13.73□□□□□ -0.21
Col2a1P28481 AC159103.1-201ENSMUST00000228325 429 ntBASIC13.73□□□□□ -0.21
Col2a1P28481 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col2a1P28481 Gm9826-201ENSMUST00000029124 1299 ntBASIC13.73□□□□□ -0.21
Col2a1P28481 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Col2a1P28481 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Col2a1P28481 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col2a1P28481 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.73□□□□□ -0.21
Col2a1P28481 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col2a1P28481 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col2a1P28481 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col2a1P28481 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col2a1P28481 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col2a1P28481 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col2a1P28481 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC13.72□□□□□ -0.21
Col2a1P28481 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col2a1P28481 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Col2a1P28481 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Col2a1P28481 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col2a1P28481 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col2a1P28481 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Col2a1P28481 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col2a1P28481 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col2a1P28481 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col2a1P28481 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Col2a1P28481 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Col2a1P28481 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC13.72□□□□□ -0.21
Col2a1P28481 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC13.72□□□□□ -0.21
Col2a1P28481 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col2a1P28481 Gm5982-201ENSMUST00000196234 512 ntBASIC13.72□□□□□ -0.21
Col2a1P28481 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col2a1P28481 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC13.72□□□□□ -0.21
Col2a1P28481 CT485606.1-201ENSMUST00000213187 878 ntBASIC13.72□□□□□ -0.21
Col2a1P28481 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col2a1P28481 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Col2a1P28481 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Col2a1P28481 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col2a1P28481 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms