Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cd40lgP27548 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cd40lgP27548 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cd40lgP27548 Gm44405-201ENSMUST00000198952 126 ntBASIC11.38□□□□□ -0.59
Cd40lgP27548 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.38□□□□□ -0.59
Cd40lgP27548 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.38□□□□□ -0.59
Cd40lgP27548 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cd40lgP27548 Gm7046-201ENSMUST00000221351 977 ntBASIC11.38□□□□□ -0.59
Cd40lgP27548 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cd40lgP27548 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC11.38□□□□□ -0.59
Cd40lgP27548 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.38□□□□□ -0.59
Cd40lgP27548 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.38□□□□□ -0.59
Cd40lgP27548 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cd40lgP27548 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cd40lgP27548 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cd40lgP27548 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cd40lgP27548 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cd40lgP27548 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.38□□□□□ -0.59
Cd40lgP27548 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cd40lgP27548 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cd40lgP27548 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cd40lgP27548 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.37□□□□□ -0.59
Cd40lgP27548 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cd40lgP27548 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Cd40lgP27548 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cd40lgP27548 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cd40lgP27548 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cd40lgP27548 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.37□□□□□ -0.59
Cd40lgP27548 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cd40lgP27548 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cd40lgP27548 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cd40lgP27548 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cd40lgP27548 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cd40lgP27548 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Cd40lgP27548 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.37□□□□□ -0.59
Cd40lgP27548 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.37□□□□□ -0.59
Cd40lgP27548 Gm13786-201ENSMUST00000122371 333 ntBASIC11.37□□□□□ -0.59
Cd40lgP27548 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC11.37□□□□□ -0.59
Cd40lgP27548 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC11.37□□□□□ -0.59
Cd40lgP27548 Gm38319-201ENSMUST00000194537 1266 ntBASIC11.37□□□□□ -0.59
Cd40lgP27548 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.37□□□□□ -0.59
Cd40lgP27548 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cd40lgP27548 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cd40lgP27548 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cd40lgP27548 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
Cd40lgP27548 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Cd40lgP27548 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Cd40lgP27548 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cd40lgP27548 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cd40lgP27548 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cd40lgP27548 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Cd40lgP27548 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cd40lgP27548 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cd40lgP27548 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cd40lgP27548 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cd40lgP27548 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cd40lgP27548 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Cd40lgP27548 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cd40lgP27548 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cd40lgP27548 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cd40lgP27548 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.36□□□□□ -0.59
Cd40lgP27548 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.36□□□□□ -0.59
Cd40lgP27548 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cd40lgP27548 Matn2-203ENSMUST00000226766 3252 ntBASIC11.36□□□□□ -0.59
Cd40lgP27548 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cd40lgP27548 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cd40lgP27548 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cd40lgP27548 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cd40lgP27548 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cd40lgP27548 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cd40lgP27548 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cd40lgP27548 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cd40lgP27548 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cd40lgP27548 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cd40lgP27548 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Cd40lgP27548 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cd40lgP27548 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Cd40lgP27548 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.36□□□□□ -0.59
Cd40lgP27548 Gm2991-201ENSMUST00000173338 480 ntBASIC11.36□□□□□ -0.59
Cd40lgP27548 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC11.36□□□□□ -0.59
Cd40lgP27548 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.36□□□□□ -0.59
Cd40lgP27548 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.36□□□□□ -0.59
Cd40lgP27548 Morn2-202ENSMUST00000227729 656 ntBASIC11.36□□□□□ -0.59
Cd40lgP27548 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.36□□□□□ -0.59
Cd40lgP27548 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cd40lgP27548 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Cd40lgP27548 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cd40lgP27548 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cd40lgP27548 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Cd40lgP27548 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cd40lgP27548 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.36□□□□□ -0.59
Cd40lgP27548 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cd40lgP27548 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.36□□□□□ -0.59
Cd40lgP27548 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cd40lgP27548 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC11.36□□□□□ -0.59
Cd40lgP27548 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Cd40lgP27548 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cd40lgP27548 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cd40lgP27548 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cd40lgP27548 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms