Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC11.8□□□□□ -0.52
BdnfP21237 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
BdnfP21237 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
BdnfP21237 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.8□□□□□ -0.52
BdnfP21237 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
BdnfP21237 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
BdnfP21237 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
BdnfP21237 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
BdnfP21237 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
BdnfP21237 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
BdnfP21237 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
BdnfP21237 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.8□□□□□ -0.52
BdnfP21237 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
BdnfP21237 Gm15163-201ENSMUST00000120749 1302 ntBASIC11.8□□□□□ -0.52
BdnfP21237 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
BdnfP21237 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
BdnfP21237 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
BdnfP21237 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
BdnfP21237 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
BdnfP21237 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
BdnfP21237 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
BdnfP21237 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.8□□□□□ -0.52
BdnfP21237 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
BdnfP21237 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
BdnfP21237 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
BdnfP21237 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.79□□□□□ -0.52
BdnfP21237 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
BdnfP21237 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
BdnfP21237 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
BdnfP21237 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
BdnfP21237 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
BdnfP21237 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.79□□□□□ -0.52
BdnfP21237 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
BdnfP21237 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
BdnfP21237 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
BdnfP21237 Gm26848-201ENSMUST00000181052 2467 ntTSL 5 BASIC11.79□□□□□ -0.52
BdnfP21237 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
BdnfP21237 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
BdnfP21237 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
BdnfP21237 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
BdnfP21237 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
BdnfP21237 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
BdnfP21237 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.79□□□□□ -0.52
BdnfP21237 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
BdnfP21237 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
BdnfP21237 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
BdnfP21237 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
BdnfP21237 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
BdnfP21237 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.79□□□□□ -0.52
BdnfP21237 Gm4768-201ENSMUST00000206199 686 ntBASIC11.79□□□□□ -0.52
BdnfP21237 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
BdnfP21237 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
BdnfP21237 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
BdnfP21237 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
BdnfP21237 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
BdnfP21237 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
BdnfP21237 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
BdnfP21237 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
BdnfP21237 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
BdnfP21237 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
BdnfP21237 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
BdnfP21237 Lrtm1-203ENSMUST00000224760 3060 ntBASIC11.79□□□□□ -0.52
BdnfP21237 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
BdnfP21237 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
BdnfP21237 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
BdnfP21237 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
BdnfP21237 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
BdnfP21237 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.78□□□□□ -0.52
BdnfP21237 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
BdnfP21237 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
BdnfP21237 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
BdnfP21237 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
BdnfP21237 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.78□□□□□ -0.52
BdnfP21237 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
BdnfP21237 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
BdnfP21237 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
BdnfP21237 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
BdnfP21237 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
BdnfP21237 Gm13437-201ENSMUST00000122434 1981 ntBASIC11.78□□□□□ -0.52
BdnfP21237 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
BdnfP21237 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
BdnfP21237 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
BdnfP21237 Gm11478-201ENSMUST00000117851 599 ntBASIC11.78□□□□□ -0.52
BdnfP21237 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.78□□□□□ -0.52
BdnfP21237 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11.78□□□□□ -0.52
BdnfP21237 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.78□□□□□ -0.52
BdnfP21237 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.78□□□□□ -0.52
BdnfP21237 Gm29649-201ENSMUST00000185649 419 ntBASIC11.78□□□□□ -0.52
BdnfP21237 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
BdnfP21237 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
BdnfP21237 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
BdnfP21237 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
BdnfP21237 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
BdnfP21237 Dyrk1a-203ENSMUST00000122284 2356 ntTSL 5 BASIC11.78□□□□□ -0.52
BdnfP21237 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.78□□□□□ -0.52
BdnfP21237 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
BdnfP21237 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
BdnfP21237 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
BdnfP21237 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
BdnfP21237 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms