Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.84□□□□□ -0.51
Fv4P11370 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Fv4P11370 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fv4P11370 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Fv4P11370 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Fv4P11370 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fv4P11370 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fv4P11370 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fv4P11370 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
Fv4P11370 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Fv4P11370 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.84□□□□□ -0.51
Fv4P11370 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Fv4P11370 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Fv4P11370 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fv4P11370 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fv4P11370 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Fv4P11370 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.84□□□□□ -0.51
Fv4P11370 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
Fv4P11370 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fv4P11370 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Fv4P11370 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fv4P11370 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fv4P11370 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fv4P11370 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fv4P11370 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.83□□□□□ -0.51
Fv4P11370 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Fv4P11370 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Fv4P11370 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fv4P11370 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fv4P11370 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fv4P11370 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fv4P11370 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fv4P11370 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.83□□□□□ -0.52
Fv4P11370 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fv4P11370 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Fv4P11370 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fv4P11370 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fv4P11370 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fv4P11370 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fv4P11370 Gm23912-201ENSMUST00000104687 87 ntBASIC11.83□□□□□ -0.52
Fv4P11370 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fv4P11370 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Fv4P11370 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Fv4P11370 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Fv4P11370 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.83□□□□□ -0.52
Fv4P11370 Gm13226-201ENSMUST00000117838 404 ntBASIC11.83□□□□□ -0.52
Fv4P11370 Gm11424-201ENSMUST00000121929 829 ntBASIC11.83□□□□□ -0.52
Fv4P11370 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.83□□□□□ -0.52
Fv4P11370 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Fv4P11370 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.83□□□□□ -0.52
Fv4P11370 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.83□□□□□ -0.52
Fv4P11370 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.83□□□□□ -0.52
Fv4P11370 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.83□□□□□ -0.52
Fv4P11370 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fv4P11370 AC140375.2-201ENSMUST00000225283 584 ntBASIC11.83□□□□□ -0.52
Fv4P11370 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fv4P11370 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Fv4P11370 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Fv4P11370 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Fv4P11370 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fv4P11370 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fv4P11370 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fv4P11370 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fv4P11370 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fv4P11370 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fv4P11370 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fv4P11370 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fv4P11370 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Fv4P11370 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fv4P11370 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.83□□□□□ -0.52
Fv4P11370 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fv4P11370 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fv4P11370 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fv4P11370 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fv4P11370 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.83□□□□□ -0.52
Fv4P11370 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fv4P11370 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Fv4P11370 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Fv4P11370 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Fv4P11370 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Fv4P11370 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Fv4P11370 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Fv4P11370 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Fv4P11370 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Fv4P11370 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.82□□□□□ -0.52
Fv4P11370 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Fv4P11370 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Fv4P11370 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Fv4P11370 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Fv4P11370 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Fv4P11370 Gm13875-201ENSMUST00000120162 282 ntBASIC11.82□□□□□ -0.52
Fv4P11370 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.82□□□□□ -0.52
Fv4P11370 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Fv4P11370 Gm13316-201ENSMUST00000140537 691 ntBASIC11.82□□□□□ -0.52
Fv4P11370 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.82□□□□□ -0.52
Fv4P11370 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.82□□□□□ -0.52
Fv4P11370 Gm8565-201ENSMUST00000183259 1014 ntBASIC11.82□□□□□ -0.52
Fv4P11370 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Fv4P11370 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.82□□□□□ -0.52
Fv4P11370 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms