Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TnfP06804 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
TnfP06804 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC12.99□□□□□ -0.33
TnfP06804 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC12.99□□□□□ -0.33
TnfP06804 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TnfP06804 Gm18734-201ENSMUST00000172937 808 ntBASIC12.99□□□□□ -0.33
TnfP06804 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TnfP06804 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TnfP06804 Mir7677-201ENSMUST00000184226 67 ntBASIC12.99□□□□□ -0.33
TnfP06804 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.99□□□□□ -0.33
TnfP06804 Gm4034-201ENSMUST00000187674 480 ntBASIC12.99□□□□□ -0.33
TnfP06804 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.99□□□□□ -0.33
TnfP06804 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.99□□□□□ -0.33
TnfP06804 Gm270-201ENSMUST00000223010 976 ntBASIC12.99□□□□□ -0.33
TnfP06804 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
TnfP06804 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
TnfP06804 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.99□□□□□ -0.33
TnfP06804 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TnfP06804 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
TnfP06804 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.99□□□□□ -0.33
TnfP06804 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TnfP06804 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TnfP06804 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TnfP06804 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.99□□□□□ -0.33
TnfP06804 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TnfP06804 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TnfP06804 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TnfP06804 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TnfP06804 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TnfP06804 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
TnfP06804 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
TnfP06804 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
TnfP06804 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
TnfP06804 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.98□□□□□ -0.33
TnfP06804 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TnfP06804 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
TnfP06804 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.98□□□□□ -0.33
TnfP06804 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TnfP06804 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
TnfP06804 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12.98□□□□□ -0.33
TnfP06804 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TnfP06804 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TnfP06804 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.98□□□□□ -0.33
TnfP06804 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
TnfP06804 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TnfP06804 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC12.98□□□□□ -0.33
TnfP06804 Gm11511-201ENSMUST00000118146 540 ntBASIC12.98□□□□□ -0.33
TnfP06804 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.98□□□□□ -0.33
TnfP06804 Gm12164-201ENSMUST00000121695 551 ntBASIC12.98□□□□□ -0.33
TnfP06804 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.98□□□□□ -0.33
TnfP06804 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TnfP06804 Gm7848-201ENSMUST00000210739 718 ntBASIC12.98□□□□□ -0.33
TnfP06804 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
TnfP06804 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.98□□□□□ -0.33
TnfP06804 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TnfP06804 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.98□□□□□ -0.33
TnfP06804 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
TnfP06804 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
TnfP06804 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
TnfP06804 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TnfP06804 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TnfP06804 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TnfP06804 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TnfP06804 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.98□□□□□ -0.33
TnfP06804 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.98□□□□□ -0.33
TnfP06804 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TnfP06804 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TnfP06804 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
TnfP06804 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TnfP06804 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TnfP06804 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TnfP06804 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
TnfP06804 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
TnfP06804 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TnfP06804 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.97□□□□□ -0.33
TnfP06804 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.97□□□□□ -0.33
TnfP06804 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.97□□□□□ -0.33
TnfP06804 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.97□□□□□ -0.33
TnfP06804 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.97□□□□□ -0.33
TnfP06804 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
TnfP06804 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.97□□□□□ -0.33
TnfP06804 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.97□□□□□ -0.33
TnfP06804 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TnfP06804 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TnfP06804 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TnfP06804 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TnfP06804 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TnfP06804 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TnfP06804 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
TnfP06804 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TnfP06804 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TnfP06804 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
TnfP06804 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TnfP06804 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TnfP06804 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TnfP06804 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TnfP06804 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TnfP06804 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.97□□□□□ -0.33
TnfP06804 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TnfP06804 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms