Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.43□□□□□ -0.42
PdgfrbP05622 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
PdgfrbP05622 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PdgfrbP05622 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
PdgfrbP05622 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.43□□□□□ -0.42
PdgfrbP05622 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
PdgfrbP05622 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PdgfrbP05622 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PdgfrbP05622 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PdgfrbP05622 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
PdgfrbP05622 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.43□□□□□ -0.42
PdgfrbP05622 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.43□□□□□ -0.42
PdgfrbP05622 Gm14542-201ENSMUST00000118460 1248 ntBASIC12.43□□□□□ -0.42
PdgfrbP05622 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.43□□□□□ -0.42
PdgfrbP05622 Tbata-209ENSMUST00000148181 1017 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
PdgfrbP05622 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.43□□□□□ -0.42
PdgfrbP05622 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
PdgfrbP05622 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.43□□□□□ -0.42
PdgfrbP05622 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.43□□□□□ -0.42
PdgfrbP05622 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC12.43□□□□□ -0.42
PdgfrbP05622 Gm43630-201ENSMUST00000201550 776 ntBASIC12.43□□□□□ -0.42
PdgfrbP05622 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
PdgfrbP05622 Gm6334-201ENSMUST00000207083 228 ntBASIC12.43□□□□□ -0.42
PdgfrbP05622 E330011O21Rik-205ENSMUST00000211317 1062 ntTSL 5 BASIC12.43□□□□□ -0.42
PdgfrbP05622 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.43□□□□□ -0.42
PdgfrbP05622 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
PdgfrbP05622 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.43□□□□□ -0.42
PdgfrbP05622 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.43□□□□□ -0.42
PdgfrbP05622 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PdgfrbP05622 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PdgfrbP05622 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PdgfrbP05622 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PdgfrbP05622 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
PdgfrbP05622 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PdgfrbP05622 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.43□□□□□ -0.42
PdgfrbP05622 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
PdgfrbP05622 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
PdgfrbP05622 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PdgfrbP05622 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
PdgfrbP05622 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PdgfrbP05622 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
PdgfrbP05622 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
PdgfrbP05622 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PdgfrbP05622 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.43□□□□□ -0.42
PdgfrbP05622 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PdgfrbP05622 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
PdgfrbP05622 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
PdgfrbP05622 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
PdgfrbP05622 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
PdgfrbP05622 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PdgfrbP05622 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
PdgfrbP05622 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
PdgfrbP05622 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PdgfrbP05622 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
PdgfrbP05622 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
PdgfrbP05622 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PdgfrbP05622 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PdgfrbP05622 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PdgfrbP05622 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.42□□□□□ -0.42
PdgfrbP05622 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
PdgfrbP05622 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.42□□□□□ -0.42
PdgfrbP05622 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
PdgfrbP05622 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
PdgfrbP05622 Gm12439-201ENSMUST00000117162 365 ntBASIC12.42□□□□□ -0.42
PdgfrbP05622 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PdgfrbP05622 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
PdgfrbP05622 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
PdgfrbP05622 Gm28882-201ENSMUST00000185504 314 ntBASIC12.42□□□□□ -0.42
PdgfrbP05622 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.42□□□□□ -0.42
PdgfrbP05622 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
PdgfrbP05622 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.42□□□□□ -0.42
PdgfrbP05622 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PdgfrbP05622 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PdgfrbP05622 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
PdgfrbP05622 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.42□□□□□ -0.42
PdgfrbP05622 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
PdgfrbP05622 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PdgfrbP05622 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PdgfrbP05622 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
PdgfrbP05622 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PdgfrbP05622 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
PdgfrbP05622 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
PdgfrbP05622 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PdgfrbP05622 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PdgfrbP05622 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
PdgfrbP05622 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PdgfrbP05622 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.42□□□□□ -0.42
PdgfrbP05622 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
PdgfrbP05622 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PdgfrbP05622 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
PdgfrbP05622 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PdgfrbP05622 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.41□□□□□ -0.42
PdgfrbP05622 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PdgfrbP05622 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.41□□□□□ -0.42
PdgfrbP05622 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.41□□□□□ -0.42
PdgfrbP05622 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
PdgfrbP05622 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PdgfrbP05622 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.41□□□□□ -0.42
PdgfrbP05622 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PdgfrbP05622 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms