Protein–RNA interactions for Protein: P04946

Ig kappa chain V-V region NQ5-89.4, mousemouse

Predictions only

Length 108 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04946 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04946 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC10.51□□□□□ -0.73
P04946 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
P04946 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04946 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
P04946 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04946 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04946 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
P04946 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04946 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04946 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04946 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04946 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
P04946 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
P04946 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04946 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC10.51□□□□□ -0.73
P04946 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
P04946 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
P04946 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
P04946 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC10.51□□□□□ -0.73
P04946 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
P04946 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC10.51□□□□□ -0.73
P04946 B9d1os-201ENSMUST00000137010 674 ntBASIC10.51□□□□□ -0.73
P04946 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC10.51□□□□□ -0.73
P04946 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC10.51□□□□□ -0.73
P04946 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC10.51□□□□□ -0.73
P04946 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
P04946 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
P04946 Gm7848-201ENSMUST00000210739 718 ntBASIC10.51□□□□□ -0.73
P04946 Gm4157-201ENSMUST00000211647 679 ntBASIC10.51□□□□□ -0.73
P04946 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
P04946 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC10.51□□□□□ -0.73
P04946 Nsd1-205ENSMUST00000224693 852 ntBASIC10.51□□□□□ -0.73
P04946 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04946 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04946 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04946 Gm26448-201ENSMUST00000082446 203 ntBASIC10.51□□□□□ -0.73
P04946 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04946 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04946 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04946 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04946 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
P04946 Gm38355-201ENSMUST00000192514 1570 ntBASIC10.51□□□□□ -0.73
P04946 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
P04946 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04946 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04946 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
P04946 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04946 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04946 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
P04946 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04946 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC10.5□□□□□ -0.73
P04946 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC10.5□□□□□ -0.73
P04946 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
P04946 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
P04946 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P04946 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P04946 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
P04946 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P04946 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
P04946 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
P04946 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
P04946 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
P04946 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P04946 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
P04946 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC10.5□□□□□ -0.73
P04946 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC10.5□□□□□ -0.73
P04946 Gm5419-201ENSMUST00000119301 527 ntBASIC10.5□□□□□ -0.73
P04946 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC10.5□□□□□ -0.73
P04946 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
P04946 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
P04946 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
P04946 Mir6979-201ENSMUST00000183927 56 ntBASIC10.5□□□□□ -0.73
P04946 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC10.5□□□□□ -0.73
P04946 Gm42629-201ENSMUST00000199063 1102 ntBASIC10.5□□□□□ -0.73
P04946 Gm8956-201ENSMUST00000203939 825 ntBASIC10.5□□□□□ -0.73
P04946 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC10.5□□□□□ -0.73
P04946 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC10.5□□□□□ -0.73
P04946 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
P04946 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P04946 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P04946 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P04946 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P04946 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
P04946 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P04946 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
P04946 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P04946 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
P04946 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
P04946 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
P04946 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
P04946 Gm7049-201ENSMUST00000223520 1712 ntBASIC10.5□□□□□ -0.73
P04946 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P04946 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
P04946 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC10.5□□□□□ -0.73
P04946 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
P04946 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
P04946 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
P04946 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
P04946 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms