Protein–RNA interactions for Protein: P01788

Ig heavy chain V region H8, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01788 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
P01788 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC9.67□□□□□ -0.86
P01788 AC069562.3-201ENSMUST00000225387 587 ntBASIC9.67□□□□□ -0.86
P01788 AC110817.1-201ENSMUST00000225706 605 ntBASIC9.67□□□□□ -0.86
P01788 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
P01788 Gm42913-201ENSMUST00000197936 1853 ntBASIC9.67□□□□□ -0.86
P01788 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
P01788 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
P01788 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
P01788 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
P01788 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
P01788 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
P01788 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
P01788 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC9.67□□□□□ -0.86
P01788 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
P01788 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
P01788 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
P01788 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
P01788 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
P01788 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
P01788 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
P01788 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
P01788 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
P01788 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
P01788 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
P01788 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
P01788 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
P01788 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
P01788 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
P01788 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
P01788 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
P01788 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
P01788 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
P01788 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
P01788 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
P01788 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
P01788 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
P01788 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
P01788 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
P01788 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC9.66□□□□□ -0.86
P01788 Mir1894-201ENSMUST00000122802 81 ntBASIC9.66□□□□□ -0.86
P01788 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
P01788 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC9.66□□□□□ -0.86
P01788 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
P01788 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC9.66□□□□□ -0.86
P01788 AC108416.1-202ENSMUST00000228927 1201 ntBASIC9.66□□□□□ -0.86
P01788 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
P01788 Gm5356-201ENSMUST00000093326 615 ntBASIC9.66□□□□□ -0.86
P01788 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
P01788 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
P01788 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
P01788 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
P01788 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
P01788 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
P01788 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
P01788 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
P01788 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
P01788 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
P01788 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
P01788 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
P01788 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
P01788 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC9.66□□□□□ -0.86
P01788 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
P01788 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
P01788 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
P01788 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
P01788 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
P01788 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
P01788 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
P01788 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC9.65□□□□□ -0.86
P01788 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
P01788 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC9.65□□□□□ -0.86
P01788 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
P01788 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
P01788 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
P01788 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
P01788 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC9.65□□□□□ -0.86
P01788 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
P01788 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
P01788 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
P01788 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
P01788 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
P01788 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
P01788 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
P01788 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
P01788 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
P01788 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
P01788 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
P01788 Gm17230-201ENSMUST00000171194 3942 ntBASIC9.65□□□□□ -0.86
P01788 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
P01788 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
P01788 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
P01788 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC9.65□□□□□ -0.86
P01788 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC9.65□□□□□ -0.86
P01788 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC9.65□□□□□ -0.86
P01788 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC9.65□□□□□ -0.86
P01788 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
P01788 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
P01788 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
P01788 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC9.65□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms