Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vti1aO89116 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Vti1aO89116 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vti1aO89116 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vti1aO89116 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vti1aO89116 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Vti1aO89116 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vti1aO89116 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Vti1aO89116 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vti1aO89116 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Vti1aO89116 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Vti1aO89116 Adra1a-206ENSMUST00000225182 2337 ntBASIC13.27□□□□□ -0.29
Vti1aO89116 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Vti1aO89116 Gm45053-201ENSMUST00000206112 2499 ntBASIC13.27□□□□□ -0.29
Vti1aO89116 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vti1aO89116 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Vti1aO89116 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vti1aO89116 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vti1aO89116 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vti1aO89116 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vti1aO89116 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vti1aO89116 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.26□□□□□ -0.29
Vti1aO89116 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Vti1aO89116 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vti1aO89116 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Vti1aO89116 Gm6963-201ENSMUST00000147879 379 ntBASIC13.26□□□□□ -0.29
Vti1aO89116 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vti1aO89116 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vti1aO89116 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vti1aO89116 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vti1aO89116 Gm43858-201ENSMUST00000199418 1778 ntBASIC13.26□□□□□ -0.29
Vti1aO89116 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vti1aO89116 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vti1aO89116 Gm43947-201ENSMUST00000203019 959 ntBASIC13.26□□□□□ -0.29
Vti1aO89116 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.26□□□□□ -0.29
Vti1aO89116 Gm18730-201ENSMUST00000218038 343 ntBASIC13.26□□□□□ -0.29
Vti1aO89116 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.26□□□□□ -0.29
Vti1aO89116 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vti1aO89116 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vti1aO89116 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Vti1aO89116 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vti1aO89116 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vti1aO89116 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vti1aO89116 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vti1aO89116 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vti1aO89116 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vti1aO89116 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vti1aO89116 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vti1aO89116 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vti1aO89116 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vti1aO89116 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vti1aO89116 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vti1aO89116 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vti1aO89116 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vti1aO89116 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vti1aO89116 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.25□□□□□ -0.29
Vti1aO89116 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vti1aO89116 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vti1aO89116 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.25□□□□□ -0.29
Vti1aO89116 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vti1aO89116 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vti1aO89116 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Vti1aO89116 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC13.25□□□□□ -0.29
Vti1aO89116 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vti1aO89116 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vti1aO89116 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vti1aO89116 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Vti1aO89116 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vti1aO89116 Gm23200-201ENSMUST00000104379 132 ntBASIC13.25□□□□□ -0.29
Vti1aO89116 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC13.25□□□□□ -0.29
Vti1aO89116 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Vti1aO89116 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC13.25□□□□□ -0.29
Vti1aO89116 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vti1aO89116 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vti1aO89116 Gm24749-201ENSMUST00000157838 343 ntBASIC13.25□□□□□ -0.29
Vti1aO89116 Gm22334-201ENSMUST00000158070 133 ntBASIC13.25□□□□□ -0.29
Vti1aO89116 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC13.25□□□□□ -0.29
Vti1aO89116 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vti1aO89116 Gm32999-201ENSMUST00000192693 562 ntBASIC13.25□□□□□ -0.29
Vti1aO89116 Gm44136-201ENSMUST00000203819 1106 ntBASIC13.25□□□□□ -0.29
Vti1aO89116 Gm17812-201ENSMUST00000204935 318 ntBASIC13.25□□□□□ -0.29
Vti1aO89116 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vti1aO89116 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vti1aO89116 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vti1aO89116 Gm26035-201ENSMUST00000083065 308 ntBASIC13.25□□□□□ -0.29
Vti1aO89116 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vti1aO89116 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Vti1aO89116 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vti1aO89116 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Vti1aO89116 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Vti1aO89116 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Vti1aO89116 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vti1aO89116 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.25□□□□□ -0.29
Vti1aO89116 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vti1aO89116 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vti1aO89116 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vti1aO89116 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vti1aO89116 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vti1aO89116 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vti1aO89116 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms