Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hcn1O88704 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hcn1O88704 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hcn1O88704 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Hcn1O88704 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hcn1O88704 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.77□□□□□ -0.53
Hcn1O88704 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hcn1O88704 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.77□□□□□ -0.53
Hcn1O88704 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Hcn1O88704 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Hcn1O88704 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Hcn1O88704 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.77□□□□□ -0.53
Hcn1O88704 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hcn1O88704 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.77□□□□□ -0.53
Hcn1O88704 Mir1247-201ENSMUST00000116706 82 ntBASIC11.77□□□□□ -0.53
Hcn1O88704 Gm15198-201ENSMUST00000117283 177 ntBASIC11.77□□□□□ -0.53
Hcn1O88704 Gm13786-201ENSMUST00000122371 333 ntBASIC11.77□□□□□ -0.53
Hcn1O88704 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.77□□□□□ -0.53
Hcn1O88704 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hcn1O88704 Gm27501-201ENSMUST00000183599 107 ntBASIC11.77□□□□□ -0.53
Hcn1O88704 Gm29396-201ENSMUST00000185659 716 ntBASIC11.77□□□□□ -0.53
Hcn1O88704 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Hcn1O88704 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Hcn1O88704 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.77□□□□□ -0.53
Hcn1O88704 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Hcn1O88704 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Hcn1O88704 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Hcn1O88704 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Hcn1O88704 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.77□□□□□ -0.53
Hcn1O88704 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hcn1O88704 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Hcn1O88704 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Hcn1O88704 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hcn1O88704 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hcn1O88704 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hcn1O88704 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.53
Hcn1O88704 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Hcn1O88704 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hcn1O88704 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hcn1O88704 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hcn1O88704 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Hcn1O88704 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
Hcn1O88704 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hcn1O88704 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hcn1O88704 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hcn1O88704 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.76□□□□□ -0.53
Hcn1O88704 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hcn1O88704 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hcn1O88704 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Hcn1O88704 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Hcn1O88704 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.76□□□□□ -0.53
Hcn1O88704 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.76□□□□□ -0.53
Hcn1O88704 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hcn1O88704 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Hcn1O88704 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hcn1O88704 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hcn1O88704 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Hcn1O88704 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hcn1O88704 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Hcn1O88704 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hcn1O88704 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hcn1O88704 Gm13492-201ENSMUST00000119772 665 ntBASIC11.76□□□□□ -0.53
Hcn1O88704 Gm13813-201ENSMUST00000120998 787 ntBASIC11.76□□□□□ -0.53
Hcn1O88704 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.76□□□□□ -0.53
Hcn1O88704 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hcn1O88704 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hcn1O88704 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Hcn1O88704 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hcn1O88704 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.76□□□□□ -0.53
Hcn1O88704 Gm38092-201ENSMUST00000195600 653 ntBASIC11.76□□□□□ -0.53
Hcn1O88704 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hcn1O88704 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.76□□□□□ -0.53
Hcn1O88704 Gm45930-201ENSMUST00000221330 292 ntBASIC11.76□□□□□ -0.53
Hcn1O88704 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.76□□□□□ -0.53
Hcn1O88704 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hcn1O88704 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hcn1O88704 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hcn1O88704 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Hcn1O88704 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hcn1O88704 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hcn1O88704 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hcn1O88704 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Hcn1O88704 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hcn1O88704 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hcn1O88704 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hcn1O88704 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hcn1O88704 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.76□□□□□ -0.53
Hcn1O88704 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.76□□□□□ -0.53
Hcn1O88704 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hcn1O88704 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hcn1O88704 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.76□□□□□ -0.53
Hcn1O88704 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
Hcn1O88704 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hcn1O88704 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Hcn1O88704 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hcn1O88704 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hcn1O88704 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hcn1O88704 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hcn1O88704 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hcn1O88704 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms