Protein–RNA interactions for Protein: O70477

Pknox1, Homeobox protein PKNOX1, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pknox1O70477 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pknox1O70477 Gm13736-201ENSMUST00000119272 253 ntBASIC12.18□□□□□ -0.46
Pknox1O70477 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.18□□□□□ -0.46
Pknox1O70477 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pknox1O70477 Gm7809-201ENSMUST00000153199 742 ntBASIC12.18□□□□□ -0.46
Pknox1O70477 Gm16379-201ENSMUST00000161469 348 ntBASIC12.18□□□□□ -0.46
Pknox1O70477 Gm3890-201ENSMUST00000182416 207 ntBASIC12.18□□□□□ -0.46
Pknox1O70477 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.18□□□□□ -0.46
Pknox1O70477 Gm8762-201ENSMUST00000193486 339 ntBASIC12.18□□□□□ -0.46
Pknox1O70477 Gm44958-201ENSMUST00000203734 736 ntBASIC12.18□□□□□ -0.46
Pknox1O70477 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.18□□□□□ -0.46
Pknox1O70477 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.18□□□□□ -0.46
Pknox1O70477 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pknox1O70477 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.18□□□□□ -0.46
Pknox1O70477 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pknox1O70477 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pknox1O70477 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pknox1O70477 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Pknox1O70477 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Pknox1O70477 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Pknox1O70477 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pknox1O70477 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pknox1O70477 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pknox1O70477 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pknox1O70477 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pknox1O70477 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pknox1O70477 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.18□□□□□ -0.46
Pknox1O70477 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pknox1O70477 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pknox1O70477 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pknox1O70477 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.18□□□□□ -0.46
Pknox1O70477 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.18□□□□□ -0.46
Pknox1O70477 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pknox1O70477 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Pknox1O70477 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.17□□□□□ -0.46
Pknox1O70477 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pknox1O70477 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pknox1O70477 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pknox1O70477 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pknox1O70477 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pknox1O70477 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pknox1O70477 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.17□□□□□ -0.46
Pknox1O70477 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Pknox1O70477 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pknox1O70477 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pknox1O70477 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pknox1O70477 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Pknox1O70477 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pknox1O70477 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.17□□□□□ -0.46
Pknox1O70477 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.17□□□□□ -0.46
Pknox1O70477 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.17□□□□□ -0.46
Pknox1O70477 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pknox1O70477 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.17□□□□□ -0.46
Pknox1O70477 Gm17150-201ENSMUST00000165577 381 ntBASIC12.17□□□□□ -0.46
Pknox1O70477 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pknox1O70477 Gm6222-202ENSMUST00000182143 629 ntBASIC12.17□□□□□ -0.46
Pknox1O70477 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.17□□□□□ -0.46
Pknox1O70477 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pknox1O70477 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.17□□□□□ -0.46
Pknox1O70477 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pknox1O70477 Snora73a-201ENSMUST00000082453 205 ntBASIC12.17□□□□□ -0.46
Pknox1O70477 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pknox1O70477 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Pknox1O70477 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Pknox1O70477 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Pknox1O70477 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Pknox1O70477 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pknox1O70477 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pknox1O70477 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pknox1O70477 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pknox1O70477 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pknox1O70477 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pknox1O70477 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pknox1O70477 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pknox1O70477 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pknox1O70477 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pknox1O70477 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Pknox1O70477 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pknox1O70477 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pknox1O70477 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pknox1O70477 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pknox1O70477 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.16□□□□□ -0.46
Pknox1O70477 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pknox1O70477 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pknox1O70477 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pknox1O70477 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pknox1O70477 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pknox1O70477 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pknox1O70477 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pknox1O70477 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.16□□□□□ -0.46
Pknox1O70477 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pknox1O70477 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.16□□□□□ -0.46
Pknox1O70477 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pknox1O70477 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pknox1O70477 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pknox1O70477 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pknox1O70477 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pknox1O70477 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pknox1O70477 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pknox1O70477 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms