Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trdmt1O55055 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trdmt1O55055 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trdmt1O55055 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Trdmt1O55055 Gm37131-201ENSMUST00000192502 1561 ntBASIC13.47□□□□□ -0.25
Trdmt1O55055 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trdmt1O55055 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trdmt1O55055 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trdmt1O55055 Gm15004-201ENSMUST00000119192 630 ntBASIC13.47□□□□□ -0.25
Trdmt1O55055 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC13.47□□□□□ -0.25
Trdmt1O55055 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC13.47□□□□□ -0.25
Trdmt1O55055 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC13.47□□□□□ -0.25
Trdmt1O55055 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC13.47□□□□□ -0.25
Trdmt1O55055 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trdmt1O55055 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trdmt1O55055 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC13.47□□□□□ -0.25
Trdmt1O55055 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC13.47□□□□□ -0.25
Trdmt1O55055 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trdmt1O55055 AC153505.1-201ENSMUST00000218819 1071 ntBASIC13.47□□□□□ -0.25
Trdmt1O55055 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trdmt1O55055 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trdmt1O55055 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trdmt1O55055 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trdmt1O55055 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trdmt1O55055 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trdmt1O55055 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trdmt1O55055 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trdmt1O55055 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trdmt1O55055 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trdmt1O55055 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trdmt1O55055 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trdmt1O55055 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trdmt1O55055 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trdmt1O55055 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trdmt1O55055 Gm37513-201ENSMUST00000194830 2268 ntBASIC13.47□□□□□ -0.25
Trdmt1O55055 Gm38378-201ENSMUST00000195153 2268 ntBASIC13.47□□□□□ -0.25
Trdmt1O55055 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trdmt1O55055 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trdmt1O55055 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trdmt1O55055 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trdmt1O55055 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trdmt1O55055 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trdmt1O55055 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trdmt1O55055 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trdmt1O55055 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trdmt1O55055 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.46□□□□□ -0.25
Trdmt1O55055 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trdmt1O55055 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trdmt1O55055 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trdmt1O55055 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trdmt1O55055 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trdmt1O55055 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trdmt1O55055 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trdmt1O55055 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trdmt1O55055 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trdmt1O55055 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trdmt1O55055 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trdmt1O55055 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trdmt1O55055 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.46□□□□□ -0.25
Trdmt1O55055 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trdmt1O55055 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trdmt1O55055 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC13.46□□□□□ -0.25
Trdmt1O55055 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC13.46□□□□□ -0.25
Trdmt1O55055 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trdmt1O55055 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC13.46□□□□□ -0.25
Trdmt1O55055 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC13.46□□□□□ -0.25
Trdmt1O55055 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC13.46□□□□□ -0.25
Trdmt1O55055 Gm43058-201ENSMUST00000197645 625 ntBASIC13.46□□□□□ -0.25
Trdmt1O55055 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trdmt1O55055 AC129219.2-201ENSMUST00000224324 701 ntBASIC13.46□□□□□ -0.25
Trdmt1O55055 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trdmt1O55055 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trdmt1O55055 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trdmt1O55055 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.46□□□□□ -0.25
Trdmt1O55055 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.46□□□□□ -0.25
Trdmt1O55055 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trdmt1O55055 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Trdmt1O55055 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Trdmt1O55055 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Trdmt1O55055 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC13.46□□□□□ -0.26
Trdmt1O55055 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trdmt1O55055 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trdmt1O55055 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.45□□□□□ -0.26
Trdmt1O55055 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trdmt1O55055 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trdmt1O55055 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC13.45□□□□□ -0.26
Trdmt1O55055 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trdmt1O55055 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trdmt1O55055 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trdmt1O55055 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
Trdmt1O55055 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trdmt1O55055 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trdmt1O55055 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trdmt1O55055 Gm15352-201ENSMUST00000118696 270 ntBASIC13.45□□□□□ -0.26
Trdmt1O55055 Gm11246-201ENSMUST00000120880 345 ntBASIC13.45□□□□□ -0.26
Trdmt1O55055 Gm15566-201ENSMUST00000121130 590 ntBASIC13.45□□□□□ -0.26
Trdmt1O55055 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Trdmt1O55055 Gm8815-201ENSMUST00000173809 620 ntBASIC13.45□□□□□ -0.26
Trdmt1O55055 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trdmt1O55055 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms