Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC10.36□□□□□ -0.75
Cxcl13O55038 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cxcl13O55038 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cxcl13O55038 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC10.36□□□□□ -0.75
Cxcl13O55038 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC10.36□□□□□ -0.75
Cxcl13O55038 Gm22902-201ENSMUST00000158488 302 ntBASIC10.36□□□□□ -0.75
Cxcl13O55038 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC10.36□□□□□ -0.75
Cxcl13O55038 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cxcl13O55038 Gm5732-201ENSMUST00000182596 1007 ntBASIC10.36□□□□□ -0.75
Cxcl13O55038 Gm42997-202ENSMUST00000200321 985 ntBASIC10.36□□□□□ -0.75
Cxcl13O55038 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cxcl13O55038 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC10.36□□□□□ -0.75
Cxcl13O55038 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cxcl13O55038 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cxcl13O55038 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Cxcl13O55038 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Cxcl13O55038 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cxcl13O55038 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Cxcl13O55038 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Cxcl13O55038 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cxcl13O55038 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cxcl13O55038 Gm9361-201ENSMUST00000198695 1507 ntBASIC10.36□□□□□ -0.75
Cxcl13O55038 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC10.36□□□□□ -0.75
Cxcl13O55038 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Cxcl13O55038 AC116503.1-201ENSMUST00000215445 2192 ntBASIC10.36□□□□□ -0.75
Cxcl13O55038 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC10.36□□□□□ -0.75
Cxcl13O55038 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cxcl13O55038 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cxcl13O55038 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cxcl13O55038 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cxcl13O55038 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cxcl13O55038 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cxcl13O55038 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cxcl13O55038 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cxcl13O55038 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cxcl13O55038 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cxcl13O55038 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cxcl13O55038 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Cxcl13O55038 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cxcl13O55038 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cxcl13O55038 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cxcl13O55038 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cxcl13O55038 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cxcl13O55038 Gm45003-201ENSMUST00000205875 2158 ntBASIC10.35□□□□□ -0.75
Cxcl13O55038 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Cxcl13O55038 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
Cxcl13O55038 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC10.35□□□□□ -0.75
Cxcl13O55038 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC10.35□□□□□ -0.75
Cxcl13O55038 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cxcl13O55038 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cxcl13O55038 Gm28719-201ENSMUST00000187779 1757 ntBASIC10.35□□□□□ -0.75
Cxcl13O55038 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cxcl13O55038 AC160405.1-201ENSMUST00000218207 1545 ntBASIC10.35□□□□□ -0.75
Cxcl13O55038 Gm43677-201ENSMUST00000198098 2378 ntBASIC10.35□□□□□ -0.75
Cxcl13O55038 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC10.35□□□□□ -0.75
Cxcl13O55038 Gm11450-201ENSMUST00000121144 333 ntBASIC10.35□□□□□ -0.75
Cxcl13O55038 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Cxcl13O55038 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC10.35□□□□□ -0.75
Cxcl13O55038 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC10.35□□□□□ -0.75
Cxcl13O55038 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC10.35□□□□□ -0.75
Cxcl13O55038 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC10.35□□□□□ -0.75
Cxcl13O55038 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cxcl13O55038 Gm4034-201ENSMUST00000187674 480 ntBASIC10.35□□□□□ -0.75
Cxcl13O55038 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cxcl13O55038 Gm34767-201ENSMUST00000191813 1062 ntBASIC10.35□□□□□ -0.75
Cxcl13O55038 Gm37986-201ENSMUST00000193285 383 ntBASIC10.35□□□□□ -0.75
Cxcl13O55038 Gm4607-201ENSMUST00000206649 577 ntBASIC10.35□□□□□ -0.75
Cxcl13O55038 Gm4157-201ENSMUST00000211647 679 ntBASIC10.35□□□□□ -0.75
Cxcl13O55038 AC131330.1-201ENSMUST00000227814 1015 ntBASIC10.35□□□□□ -0.75
Cxcl13O55038 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cxcl13O55038 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cxcl13O55038 Gm26448-201ENSMUST00000082446 203 ntBASIC10.35□□□□□ -0.75
Cxcl13O55038 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cxcl13O55038 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cxcl13O55038 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cxcl13O55038 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cxcl13O55038 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cxcl13O55038 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cxcl13O55038 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cxcl13O55038 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cxcl13O55038 Gm43364-201ENSMUST00000196046 3274 ntBASIC10.35□□□□□ -0.75
Cxcl13O55038 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cxcl13O55038 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC10.35□□□□□ -0.75
Cxcl13O55038 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cxcl13O55038 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC10.35□□□□□ -0.75
Cxcl13O55038 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cxcl13O55038 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC10.35□□□□□ -0.75
Cxcl13O55038 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cxcl13O55038 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cxcl13O55038 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cxcl13O55038 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Cxcl13O55038 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC10.35□□□□□ -0.75
Cxcl13O55038 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cxcl13O55038 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cxcl13O55038 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cxcl13O55038 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cxcl13O55038 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cxcl13O55038 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Cxcl13O55038 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cxcl13O55038 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms