Protein–RNA interactions for Protein: O55029

Copb2, Coatomer subunit beta', mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb2O55029 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Copb2O55029 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Copb2O55029 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Copb2O55029 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Copb2O55029 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Copb2O55029 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Copb2O55029 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Copb2O55029 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Copb2O55029 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.15
Copb2O55029 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Copb2O55029 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Copb2O55029 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.15
Copb2O55029 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC14.08□□□□□ -0.15
Copb2O55029 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Copb2O55029 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC14.08□□□□□ -0.16
Copb2O55029 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Copb2O55029 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Copb2O55029 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Copb2O55029 Gm11331-201ENSMUST00000119764 288 ntBASIC14.08□□□□□ -0.16
Copb2O55029 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC14.08□□□□□ -0.16
Copb2O55029 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC14.08□□□□□ -0.16
Copb2O55029 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC14.08□□□□□ -0.16
Copb2O55029 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC14.08□□□□□ -0.16
Copb2O55029 Rprl1-201ENSMUST00000158050 327 ntBASIC14.08□□□□□ -0.16
Copb2O55029 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC14.08□□□□□ -0.16
Copb2O55029 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC14.08□□□□□ -0.16
Copb2O55029 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC14.08□□□□□ -0.16
Copb2O55029 AU022133-201ENSMUST00000200601 873 ntBASIC14.08□□□□□ -0.16
Copb2O55029 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC14.08□□□□□ -0.16
Copb2O55029 AC153954.1-201ENSMUST00000216959 255 ntBASIC14.08□□□□□ -0.16
Copb2O55029 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Copb2O55029 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Copb2O55029 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC14.08□□□□□ -0.16
Copb2O55029 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Copb2O55029 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Copb2O55029 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Copb2O55029 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Copb2O55029 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Copb2O55029 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Copb2O55029 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Copb2O55029 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Copb2O55029 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Copb2O55029 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Copb2O55029 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Copb2O55029 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Copb2O55029 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Copb2O55029 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Copb2O55029 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Copb2O55029 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Copb2O55029 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Copb2O55029 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Copb2O55029 Gm22902-201ENSMUST00000158488 302 ntBASIC14.07□□□□□ -0.16
Copb2O55029 Mir3547-201ENSMUST00000175461 88 ntBASIC14.07□□□□□ -0.16
Copb2O55029 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Copb2O55029 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Copb2O55029 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC14.07□□□□□ -0.16
Copb2O55029 Gm5455-201ENSMUST00000058710 715 ntBASIC14.07□□□□□ -0.16
Copb2O55029 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Copb2O55029 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Copb2O55029 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Copb2O55029 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC14.07□□□□□ -0.16
Copb2O55029 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
Copb2O55029 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Copb2O55029 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC14.07□□□□□ -0.16
Copb2O55029 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Copb2O55029 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Copb2O55029 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Copb2O55029 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Copb2O55029 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Copb2O55029 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Copb2O55029 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Copb2O55029 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Copb2O55029 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Copb2O55029 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Copb2O55029 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Copb2O55029 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Copb2O55029 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Copb2O55029 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Copb2O55029 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Copb2O55029 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Copb2O55029 Cog3-203ENSMUST00000227473 4197 ntBASIC14.06□□□□□ -0.16
Copb2O55029 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Copb2O55029 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Copb2O55029 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Copb2O55029 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Copb2O55029 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Copb2O55029 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Copb2O55029 Gm22133-201ENSMUST00000102082 109 ntBASIC14.06□□□□□ -0.16
Copb2O55029 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Copb2O55029 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Copb2O55029 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC14.06□□□□□ -0.16
Copb2O55029 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Copb2O55029 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC14.06□□□□□ -0.16
Copb2O55029 Gm23699-201ENSMUST00000158835 135 ntBASIC14.06□□□□□ -0.16
Copb2O55029 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Copb2O55029 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC14.06□□□□□ -0.16
Copb2O55029 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC14.06□□□□□ -0.16
Copb2O55029 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC14.06□□□□□ -0.16
Copb2O55029 Gm17827-201ENSMUST00000211825 742 ntBASIC14.06□□□□□ -0.16
Copb2O55029 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms