Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Rnu1b6-201ENSMUST00000083839 166 ntBASIC10.95□□□□□ -0.66
Alx4O35137 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Alx4O35137 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC10.95□□□□□ -0.66
Alx4O35137 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Alx4O35137 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Alx4O35137 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Alx4O35137 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Alx4O35137 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Alx4O35137 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Alx4O35137 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Alx4O35137 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Alx4O35137 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Alx4O35137 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Alx4O35137 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Alx4O35137 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Alx4O35137 AC126257.2-201ENSMUST00000215507 2300 ntBASIC10.95□□□□□ -0.66
Alx4O35137 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Alx4O35137 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC10.95□□□□□ -0.66
Alx4O35137 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Alx4O35137 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Alx4O35137 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Alx4O35137 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Alx4O35137 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Alx4O35137 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Alx4O35137 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Alx4O35137 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Alx4O35137 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Alx4O35137 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC10.94□□□□□ -0.66
Alx4O35137 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
Alx4O35137 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Alx4O35137 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Alx4O35137 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Alx4O35137 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Alx4O35137 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC10.94□□□□□ -0.66
Alx4O35137 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Alx4O35137 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Alx4O35137 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Alx4O35137 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Alx4O35137 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC10.94□□□□□ -0.66
Alx4O35137 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Alx4O35137 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Alx4O35137 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Alx4O35137 Gm22331-201ENSMUST00000158066 136 ntBASIC10.94□□□□□ -0.66
Alx4O35137 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC10.94□□□□□ -0.66
Alx4O35137 Gm6473-201ENSMUST00000188572 1210 ntBASIC10.94□□□□□ -0.66
Alx4O35137 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Alx4O35137 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC10.94□□□□□ -0.66
Alx4O35137 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC10.94□□□□□ -0.66
Alx4O35137 Gm29705-201ENSMUST00000212598 474 ntBASIC10.94□□□□□ -0.66
Alx4O35137 AC126253.1-202ENSMUST00000226732 835 ntBASIC10.94□□□□□ -0.66
Alx4O35137 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Alx4O35137 Cog3-203ENSMUST00000227473 4197 ntBASIC10.94□□□□□ -0.66
Alx4O35137 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC10.94□□□□□ -0.66
Alx4O35137 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Alx4O35137 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Alx4O35137 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Alx4O35137 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
Alx4O35137 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Alx4O35137 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Alx4O35137 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
Alx4O35137 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Alx4O35137 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Alx4O35137 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Alx4O35137 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Alx4O35137 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
Alx4O35137 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Alx4O35137 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Alx4O35137 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Alx4O35137 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC10.93□□□□□ -0.66
Alx4O35137 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Alx4O35137 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Alx4O35137 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
Alx4O35137 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Alx4O35137 Gm2128-201ENSMUST00000108009 2560 ntBASIC10.93□□□□□ -0.66
Alx4O35137 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC10.93□□□□□ -0.66
Alx4O35137 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Alx4O35137 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
Alx4O35137 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC10.93□□□□□ -0.66
Alx4O35137 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Alx4O35137 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Alx4O35137 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC10.93□□□□□ -0.66
Alx4O35137 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC10.93□□□□□ -0.66
Alx4O35137 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Alx4O35137 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Alx4O35137 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC10.93□□□□□ -0.66
Alx4O35137 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC10.93□□□□□ -0.66
Alx4O35137 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC10.93□□□□□ -0.66
Alx4O35137 Gm6244-201ENSMUST00000178732 841 ntBASIC10.93□□□□□ -0.66
Alx4O35137 Gm26927-201ENSMUST00000182385 965 ntBASIC10.93□□□□□ -0.66
Alx4O35137 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Alx4O35137 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Alx4O35137 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Alx4O35137 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Alx4O35137 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Alx4O35137 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Alx4O35137 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Alx4O35137 Gm43860-201ENSMUST00000201742 2705 ntBASIC10.93□□□□□ -0.66
Alx4O35137 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Alx4O35137 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Alx4O35137 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms