Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.56□□□□□ -0.4
Pcdh9F8VPK8 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.56□□□□□ -0.4
Pcdh9F8VPK8 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.56□□□□□ -0.4
Pcdh9F8VPK8 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh9F8VPK8 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh9F8VPK8 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh9F8VPK8 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh9F8VPK8 Paupar-201ENSMUST00000194826 3482 ntBASIC12.56□□□□□ -0.4
Pcdh9F8VPK8 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh9F8VPK8 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh9F8VPK8 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh9F8VPK8 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh9F8VPK8 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh9F8VPK8 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh9F8VPK8 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh9F8VPK8 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh9F8VPK8 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh9F8VPK8 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh9F8VPK8 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh9F8VPK8 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh9F8VPK8 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh9F8VPK8 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh9F8VPK8 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh9F8VPK8 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh9F8VPK8 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.55□□□□□ -0.4
Pcdh9F8VPK8 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh9F8VPK8 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Pcdh9F8VPK8 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.55□□□□□ -0.4
Pcdh9F8VPK8 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh9F8VPK8 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh9F8VPK8 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Pcdh9F8VPK8 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.55□□□□□ -0.4
Pcdh9F8VPK8 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh9F8VPK8 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
Pcdh9F8VPK8 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh9F8VPK8 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh9F8VPK8 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh9F8VPK8 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh9F8VPK8 Gm14127-201ENSMUST00000117906 678 ntBASIC12.55□□□□□ -0.4
Pcdh9F8VPK8 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh9F8VPK8 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.55□□□□□ -0.4
Pcdh9F8VPK8 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.55□□□□□ -0.4
Pcdh9F8VPK8 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh9F8VPK8 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh9F8VPK8 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Pcdh9F8VPK8 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.55□□□□□ -0.4
Pcdh9F8VPK8 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.55□□□□□ -0.4
Pcdh9F8VPK8 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.55□□□□□ -0.4
Pcdh9F8VPK8 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh9F8VPK8 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh9F8VPK8 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Pcdh9F8VPK8 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh9F8VPK8 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh9F8VPK8 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh9F8VPK8 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
Pcdh9F8VPK8 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh9F8VPK8 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh9F8VPK8 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.55□□□□□ -0.4
Pcdh9F8VPK8 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Pcdh9F8VPK8 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.55□□□□□ -0.4
Pcdh9F8VPK8 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh9F8VPK8 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh9F8VPK8 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
Pcdh9F8VPK8 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh9F8VPK8 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Pcdh9F8VPK8 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Pcdh9F8VPK8 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh9F8VPK8 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh9F8VPK8 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh9F8VPK8 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Pcdh9F8VPK8 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh9F8VPK8 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh9F8VPK8 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh9F8VPK8 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh9F8VPK8 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh9F8VPK8 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.54□□□□□ -0.4
Pcdh9F8VPK8 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Pcdh9F8VPK8 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh9F8VPK8 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Pcdh9F8VPK8 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh9F8VPK8 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.54□□□□□ -0.4
Pcdh9F8VPK8 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh9F8VPK8 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh9F8VPK8 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Pcdh9F8VPK8 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh9F8VPK8 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.54□□□□□ -0.4
Pcdh9F8VPK8 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh9F8VPK8 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Pcdh9F8VPK8 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh9F8VPK8 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh9F8VPK8 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh9F8VPK8 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Pcdh9F8VPK8 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh9F8VPK8 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh9F8VPK8 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Pcdh9F8VPK8 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh9F8VPK8 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh9F8VPK8 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh9F8VPK8 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.54□□□□□ -0.4
Pcdh9F8VPK8 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms