Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh1F7BJK1 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh1F7BJK1 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh1F7BJK1 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh1F7BJK1 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Pcdh1F7BJK1 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh1F7BJK1 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.04□□□□□ -0.64
Pcdh1F7BJK1 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Pcdh1F7BJK1 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh1F7BJK1 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh1F7BJK1 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh1F7BJK1 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh1F7BJK1 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.04□□□□□ -0.64
Pcdh1F7BJK1 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh1F7BJK1 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh1F7BJK1 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh1F7BJK1 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh1F7BJK1 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh1F7BJK1 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh1F7BJK1 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
Pcdh1F7BJK1 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh1F7BJK1 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC11.04□□□□□ -0.64
Pcdh1F7BJK1 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh1F7BJK1 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh1F7BJK1 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh1F7BJK1 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Pcdh1F7BJK1 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh1F7BJK1 Mup-ps23-201ENSMUST00000118063 630 ntBASIC11.04□□□□□ -0.64
Pcdh1F7BJK1 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.04□□□□□ -0.64
Pcdh1F7BJK1 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC11.04□□□□□ -0.64
Pcdh1F7BJK1 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC11.04□□□□□ -0.64
Pcdh1F7BJK1 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Pcdh1F7BJK1 Gm6244-201ENSMUST00000178732 841 ntBASIC11.04□□□□□ -0.64
Pcdh1F7BJK1 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh1F7BJK1 AC110817.1-201ENSMUST00000225706 605 ntBASIC11.04□□□□□ -0.64
Pcdh1F7BJK1 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh1F7BJK1 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh1F7BJK1 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh1F7BJK1 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh1F7BJK1 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Pcdh1F7BJK1 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Pcdh1F7BJK1 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh1F7BJK1 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh1F7BJK1 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.04□□□□□ -0.64
Pcdh1F7BJK1 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh1F7BJK1 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.04□□□□□ -0.64
Pcdh1F7BJK1 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh1F7BJK1 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh1F7BJK1 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Pcdh1F7BJK1 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.04□□□□□ -0.64
Pcdh1F7BJK1 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh1F7BJK1 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
Pcdh1F7BJK1 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh1F7BJK1 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.04□□□□□ -0.64
Pcdh1F7BJK1 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh1F7BJK1 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Pcdh1F7BJK1 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh1F7BJK1 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.04□□□□□ -0.64
Pcdh1F7BJK1 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh1F7BJK1 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
Pcdh1F7BJK1 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdh1F7BJK1 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.03□□□□□ -0.64
Pcdh1F7BJK1 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdh1F7BJK1 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdh1F7BJK1 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.03□□□□□ -0.64
Pcdh1F7BJK1 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdh1F7BJK1 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdh1F7BJK1 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdh1F7BJK1 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.03□□□□□ -0.64
Pcdh1F7BJK1 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdh1F7BJK1 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdh1F7BJK1 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Pcdh1F7BJK1 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Pcdh1F7BJK1 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.03□□□□□ -0.64
Pcdh1F7BJK1 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Pcdh1F7BJK1 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdh1F7BJK1 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdh1F7BJK1 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.03□□□□□ -0.64
Pcdh1F7BJK1 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdh1F7BJK1 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdh1F7BJK1 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
Pcdh1F7BJK1 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC11.03□□□□□ -0.64
Pcdh1F7BJK1 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.03□□□□□ -0.64
Pcdh1F7BJK1 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdh1F7BJK1 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdh1F7BJK1 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdh1F7BJK1 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.03□□□□□ -0.64
Pcdh1F7BJK1 Gm45059-201ENSMUST00000205558 1077 ntBASIC11.03□□□□□ -0.64
Pcdh1F7BJK1 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdh1F7BJK1 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.03□□□□□ -0.64
Pcdh1F7BJK1 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.03□□□□□ -0.64
Pcdh1F7BJK1 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdh1F7BJK1 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdh1F7BJK1 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Pcdh1F7BJK1 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdh1F7BJK1 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdh1F7BJK1 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Pcdh1F7BJK1 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Pcdh1F7BJK1 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Pcdh1F7BJK1 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms