Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Gm10581-201ENSMUST00000097986 231 ntBASIC12.32□□□□□ -0.44
Ccdc188F6WEU2 Gm10582-201ENSMUST00000097987 396 ntBASIC12.32□□□□□ -0.44
Ccdc188F6WEU2 Gm10583-201ENSMUST00000097988 396 ntBASIC12.32□□□□□ -0.44
Ccdc188F6WEU2 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Ccdc188F6WEU2 AC174797.1-201ENSMUST00000224339 1649 ntBASIC12.32□□□□□ -0.44
Ccdc188F6WEU2 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc188F6WEU2 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc188F6WEU2 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc188F6WEU2 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC12.32□□□□□ -0.44
Ccdc188F6WEU2 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Ccdc188F6WEU2 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc188F6WEU2 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc188F6WEU2 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc188F6WEU2 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc188F6WEU2 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc188F6WEU2 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc188F6WEU2 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc188F6WEU2 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc188F6WEU2 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc188F6WEU2 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.31□□□□□ -0.44
Ccdc188F6WEU2 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc188F6WEU2 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ccdc188F6WEU2 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.31□□□□□ -0.44
Ccdc188F6WEU2 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc188F6WEU2 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc188F6WEU2 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Ccdc188F6WEU2 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.31□□□□□ -0.44
Ccdc188F6WEU2 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc188F6WEU2 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc188F6WEU2 Gm24231-201ENSMUST00000104315 133 ntBASIC12.31□□□□□ -0.44
Ccdc188F6WEU2 Gm13171-201ENSMUST00000117233 391 ntBASIC12.31□□□□□ -0.44
Ccdc188F6WEU2 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC12.31□□□□□ -0.44
Ccdc188F6WEU2 Gm22388-201ENSMUST00000158194 248 ntBASIC12.31□□□□□ -0.44
Ccdc188F6WEU2 Gm25830-201ENSMUST00000158923 132 ntBASIC12.31□□□□□ -0.44
Ccdc188F6WEU2 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC12.31□□□□□ -0.44
Ccdc188F6WEU2 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC12.31□□□□□ -0.44
Ccdc188F6WEU2 Gm42655-201ENSMUST00000202782 1134 ntBASIC12.31□□□□□ -0.44
Ccdc188F6WEU2 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc188F6WEU2 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc188F6WEU2 Gm8436-201ENSMUST00000210152 1080 ntBASIC12.31□□□□□ -0.44
Ccdc188F6WEU2 Gm5749-201ENSMUST00000210673 1090 ntBASIC12.31□□□□□ -0.44
Ccdc188F6WEU2 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC12.31□□□□□ -0.44
Ccdc188F6WEU2 AC162932.1-201ENSMUST00000219209 872 ntBASIC12.31□□□□□ -0.44
Ccdc188F6WEU2 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Ccdc188F6WEU2 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC12.31□□□□□ -0.44
Ccdc188F6WEU2 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc188F6WEU2 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Ccdc188F6WEU2 AC159810.1-201ENSMUST00000214838 1480 ntBASIC12.31□□□□□ -0.44
Ccdc188F6WEU2 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc188F6WEU2 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc188F6WEU2 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.31□□□□□ -0.44
Ccdc188F6WEU2 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Ccdc188F6WEU2 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc188F6WEU2 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc188F6WEU2 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc188F6WEU2 Gm6641-201ENSMUST00000196100 1315 ntBASIC12.31□□□□□ -0.44
Ccdc188F6WEU2 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc188F6WEU2 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.31□□□□□ -0.44
Ccdc188F6WEU2 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc188F6WEU2 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc188F6WEU2 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc188F6WEU2 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc188F6WEU2 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Ccdc188F6WEU2 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.31□□□□□ -0.44
Ccdc188F6WEU2 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC12.3□□□□□ -0.44
Ccdc188F6WEU2 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc188F6WEU2 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Ccdc188F6WEU2 Gm44913-201ENSMUST00000208060 2990 ntBASIC12.3□□□□□ -0.44
Ccdc188F6WEU2 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc188F6WEU2 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc188F6WEU2 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.3□□□□□ -0.44
Ccdc188F6WEU2 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc188F6WEU2 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc188F6WEU2 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc188F6WEU2 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc188F6WEU2 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Ccdc188F6WEU2 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Ccdc188F6WEU2 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Ccdc188F6WEU2 Gm5395-201ENSMUST00000121650 915 ntBASIC12.3□□□□□ -0.44
Ccdc188F6WEU2 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Ccdc188F6WEU2 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Ccdc188F6WEU2 Gm4775-201ENSMUST00000169588 402 ntBASIC12.3□□□□□ -0.44
Ccdc188F6WEU2 Gm24328-201ENSMUST00000175104 67 ntBASIC12.3□□□□□ -0.44
Ccdc188F6WEU2 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Ccdc188F6WEU2 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC12.3□□□□□ -0.44
Ccdc188F6WEU2 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Ccdc188F6WEU2 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc188F6WEU2 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC12.3□□□□□ -0.44
Ccdc188F6WEU2 Gzmk-201ENSMUST00000038212 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc188F6WEU2 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Ccdc188F6WEU2 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.3□□□□□ -0.44
Ccdc188F6WEU2 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Ccdc188F6WEU2 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Ccdc188F6WEU2 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc188F6WEU2 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc188F6WEU2 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc188F6WEU2 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc188F6WEU2 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc188F6WEU2 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc188F6WEU2 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms