Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm28043E0CXC2 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm28043E0CXC2 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm28043E0CXC2 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm28043E0CXC2 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC12.33□□□□□ -0.44
Gm28043E0CXC2 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Gm28043E0CXC2 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.33□□□□□ -0.44
Gm28043E0CXC2 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm28043E0CXC2 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.33□□□□□ -0.44
Gm28043E0CXC2 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm28043E0CXC2 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm28043E0CXC2 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm28043E0CXC2 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm28043E0CXC2 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Gm28043E0CXC2 Snord83b-201ENSMUST00000104546 94 ntBASIC12.33□□□□□ -0.44
Gm28043E0CXC2 Gm13226-201ENSMUST00000117838 404 ntBASIC12.33□□□□□ -0.44
Gm28043E0CXC2 Gm14704-201ENSMUST00000120300 874 ntBASIC12.33□□□□□ -0.44
Gm28043E0CXC2 Gm40466-201ENSMUST00000212174 422 ntBASIC12.33□□□□□ -0.44
Gm28043E0CXC2 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.33□□□□□ -0.44
Gm28043E0CXC2 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm28043E0CXC2 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm28043E0CXC2 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm28043E0CXC2 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.33□□□□□ -0.44
Gm28043E0CXC2 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm28043E0CXC2 Atg10-201ENSMUST00000022119 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm28043E0CXC2 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm28043E0CXC2 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm28043E0CXC2 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.33□□□□□ -0.44
Gm28043E0CXC2 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm28043E0CXC2 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.33□□□□□ -0.44
Gm28043E0CXC2 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm28043E0CXC2 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm28043E0CXC2 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Gm28043E0CXC2 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm28043E0CXC2 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm28043E0CXC2 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm28043E0CXC2 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm28043E0CXC2 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm28043E0CXC2 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.32□□□□□ -0.44
Gm28043E0CXC2 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm28043E0CXC2 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.32□□□□□ -0.44
Gm28043E0CXC2 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Gm28043E0CXC2 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Gm28043E0CXC2 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC12.32□□□□□ -0.44
Gm28043E0CXC2 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC12.32□□□□□ -0.44
Gm28043E0CXC2 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm28043E0CXC2 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm28043E0CXC2 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Gm28043E0CXC2 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Gm28043E0CXC2 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Gm28043E0CXC2 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm28043E0CXC2 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm28043E0CXC2 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm28043E0CXC2 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm28043E0CXC2 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Gm28043E0CXC2 Gm14660-201ENSMUST00000119809 575 ntBASIC12.32□□□□□ -0.44
Gm28043E0CXC2 Gm13813-201ENSMUST00000120998 787 ntBASIC12.32□□□□□ -0.44
Gm28043E0CXC2 Gm12363-201ENSMUST00000122250 668 ntBASIC12.32□□□□□ -0.44
Gm28043E0CXC2 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Gm28043E0CXC2 Gm27731-201ENSMUST00000185192 107 ntBASIC12.32□□□□□ -0.44
Gm28043E0CXC2 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.32□□□□□ -0.44
Gm28043E0CXC2 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.32□□□□□ -0.44
Gm28043E0CXC2 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.32□□□□□ -0.44
Gm28043E0CXC2 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Gm28043E0CXC2 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm28043E0CXC2 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm28043E0CXC2 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Gm28043E0CXC2 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm28043E0CXC2 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm28043E0CXC2 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Gm28043E0CXC2 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm28043E0CXC2 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.32□□□□□ -0.44
Gm28043E0CXC2 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.32□□□□□ -0.44
Gm28043E0CXC2 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm28043E0CXC2 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Gm28043E0CXC2 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm28043E0CXC2 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Gm28043E0CXC2 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.32□□□□□ -0.44
Gm28043E0CXC2 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.32□□□□□ -0.44
Gm28043E0CXC2 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm28043E0CXC2 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm28043E0CXC2 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.31□□□□□ -0.44
Gm28043E0CXC2 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Gm28043E0CXC2 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Gm28043E0CXC2 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Gm28043E0CXC2 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm28043E0CXC2 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Gm28043E0CXC2 AC127597.1-201ENSMUST00000225697 5711 ntBASIC12.31□□□□□ -0.44
Gm28043E0CXC2 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm28043E0CXC2 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm28043E0CXC2 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Gm28043E0CXC2 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm28043E0CXC2 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Gm28043E0CXC2 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Gm28043E0CXC2 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.31□□□□□ -0.44
Gm28043E0CXC2 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.31□□□□□ -0.44
Gm28043E0CXC2 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.31□□□□□ -0.44
Gm28043E0CXC2 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.31□□□□□ -0.44
Gm28043E0CXC2 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.31□□□□□ -0.44
Gm28043E0CXC2 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms