Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC11□□□□□ -0.65
Shank1D3YZU1 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC11□□□□□ -0.65
Shank1D3YZU1 Gm28388-201ENSMUST00000186262 437 ntBASIC11□□□□□ -0.65
Shank1D3YZU1 Gm43520-201ENSMUST00000197996 164 ntBASIC11□□□□□ -0.65
Shank1D3YZU1 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11□□□□□ -0.65
Shank1D3YZU1 AC122408.1-201ENSMUST00000218949 218 ntBASIC11□□□□□ -0.65
Shank1D3YZU1 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11□□□□□ -0.65
Shank1D3YZU1 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Shank1D3YZU1 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Shank1D3YZU1 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Shank1D3YZU1 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Shank1D3YZU1 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Shank1D3YZU1 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Shank1D3YZU1 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Shank1D3YZU1 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Shank1D3YZU1 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Shank1D3YZU1 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Shank1D3YZU1 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Shank1D3YZU1 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Shank1D3YZU1 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Shank1D3YZU1 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Shank1D3YZU1 Gm4726-201ENSMUST00000135604 736 ntBASIC10.99□□□□□ -0.65
Shank1D3YZU1 Gm6019-201ENSMUST00000148369 736 ntBASIC10.99□□□□□ -0.65
Shank1D3YZU1 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC10.99□□□□□ -0.65
Shank1D3YZU1 Mir7677-201ENSMUST00000184226 67 ntBASIC10.99□□□□□ -0.65
Shank1D3YZU1 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Shank1D3YZU1 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Shank1D3YZU1 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Shank1D3YZU1 Gm8325-201ENSMUST00000099086 453 ntBASIC10.99□□□□□ -0.65
Shank1D3YZU1 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Shank1D3YZU1 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Shank1D3YZU1 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Shank1D3YZU1 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Shank1D3YZU1 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Shank1D3YZU1 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Shank1D3YZU1 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Shank1D3YZU1 Gm3765-201ENSMUST00000130985 1447 ntBASIC10.99□□□□□ -0.65
Shank1D3YZU1 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Shank1D3YZU1 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Shank1D3YZU1 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC10.99□□□□□ -0.65
Shank1D3YZU1 Gm42863-201ENSMUST00000197875 2958 ntBASIC10.99□□□□□ -0.65
Shank1D3YZU1 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Shank1D3YZU1 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Shank1D3YZU1 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC10.99□□□□□ -0.65
Shank1D3YZU1 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Shank1D3YZU1 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Shank1D3YZU1 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC10.99□□□□□ -0.65
Shank1D3YZU1 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Shank1D3YZU1 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Shank1D3YZU1 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Shank1D3YZU1 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Shank1D3YZU1 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Shank1D3YZU1 Gm23771-201ENSMUST00000178702 110 ntBASIC10.99□□□□□ -0.65
Shank1D3YZU1 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC10.99□□□□□ -0.65
Shank1D3YZU1 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Shank1D3YZU1 Gm4157-201ENSMUST00000211647 679 ntBASIC10.99□□□□□ -0.65
Shank1D3YZU1 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Shank1D3YZU1 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Shank1D3YZU1 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Shank1D3YZU1 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Shank1D3YZU1 Gm9873-201ENSMUST00000063891 1097 ntBASIC10.99□□□□□ -0.65
Shank1D3YZU1 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Shank1D3YZU1 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Shank1D3YZU1 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Shank1D3YZU1 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Shank1D3YZU1 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Shank1D3YZU1 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Shank1D3YZU1 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Shank1D3YZU1 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Shank1D3YZU1 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Shank1D3YZU1 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Shank1D3YZU1 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Shank1D3YZU1 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC10.98□□□□□ -0.65
Shank1D3YZU1 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC10.98□□□□□ -0.65
Shank1D3YZU1 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
Shank1D3YZU1 Gm9129-201ENSMUST00000218173 1689 ntBASIC10.98□□□□□ -0.65
Shank1D3YZU1 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Shank1D3YZU1 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC10.98□□□□□ -0.65
Shank1D3YZU1 Gm23596-201ENSMUST00000104304 132 ntBASIC10.98□□□□□ -0.65
Shank1D3YZU1 Gm11451-201ENSMUST00000118946 630 ntBASIC10.98□□□□□ -0.65
Shank1D3YZU1 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC10.98□□□□□ -0.65
Shank1D3YZU1 Gm15703-201ENSMUST00000120250 880 ntBASIC10.98□□□□□ -0.65
Shank1D3YZU1 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Shank1D3YZU1 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Shank1D3YZU1 Gm6867-201ENSMUST00000219165 425 ntBASIC10.98□□□□□ -0.65
Shank1D3YZU1 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC10.98□□□□□ -0.65
Shank1D3YZU1 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Shank1D3YZU1 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC10.98□□□□□ -0.65
Shank1D3YZU1 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Shank1D3YZU1 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Shank1D3YZU1 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Shank1D3YZU1 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Shank1D3YZU1 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Shank1D3YZU1 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Shank1D3YZU1 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Shank1D3YZU1 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Shank1D3YZU1 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Shank1D3YZU1 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Shank1D3YZU1 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Shank1D3YZU1 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms