Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Scn1aA2APX8 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Scn1aA2APX8 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.78□□□□□ -0.36
Scn1aA2APX8 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn1aA2APX8 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Scn1aA2APX8 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn1aA2APX8 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC12.78□□□□□ -0.36
Scn1aA2APX8 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.78□□□□□ -0.36
Scn1aA2APX8 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn1aA2APX8 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.78□□□□□ -0.36
Scn1aA2APX8 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Scn1aA2APX8 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn1aA2APX8 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Scn1aA2APX8 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn1aA2APX8 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn1aA2APX8 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn1aA2APX8 Gm13045-201ENSMUST00000119019 712 ntBASIC12.78□□□□□ -0.36
Scn1aA2APX8 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC12.78□□□□□ -0.36
Scn1aA2APX8 Gm12266-201ENSMUST00000120311 962 ntBASIC12.78□□□□□ -0.36
Scn1aA2APX8 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC12.78□□□□□ -0.36
Scn1aA2APX8 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.78□□□□□ -0.36
Scn1aA2APX8 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC12.78□□□□□ -0.36
Scn1aA2APX8 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC12.78□□□□□ -0.36
Scn1aA2APX8 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Scn1aA2APX8 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC12.78□□□□□ -0.36
Scn1aA2APX8 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Scn1aA2APX8 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC12.78□□□□□ -0.36
Scn1aA2APX8 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn1aA2APX8 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.78□□□□□ -0.36
Scn1aA2APX8 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Scn1aA2APX8 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Scn1aA2APX8 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Scn1aA2APX8 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Scn1aA2APX8 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Scn1aA2APX8 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Scn1aA2APX8 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Scn1aA2APX8 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
Scn1aA2APX8 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Scn1aA2APX8 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
Scn1aA2APX8 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.77□□□□□ -0.37
Scn1aA2APX8 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn1aA2APX8 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn1aA2APX8 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn1aA2APX8 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn1aA2APX8 Gm28686-201ENSMUST00000187404 609 ntBASIC12.77□□□□□ -0.37
Scn1aA2APX8 Gm28071-201ENSMUST00000190355 478 ntBASIC12.77□□□□□ -0.37
Scn1aA2APX8 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Scn1aA2APX8 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.77□□□□□ -0.37
Scn1aA2APX8 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn1aA2APX8 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn1aA2APX8 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn1aA2APX8 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn1aA2APX8 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn1aA2APX8 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Scn1aA2APX8 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn1aA2APX8 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Scn1aA2APX8 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.77□□□□□ -0.37
Scn1aA2APX8 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn1aA2APX8 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Scn1aA2APX8 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.76□□□□□ -0.37
Scn1aA2APX8 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn1aA2APX8 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Scn1aA2APX8 Gm11450-201ENSMUST00000121144 333 ntBASIC12.76□□□□□ -0.37
Scn1aA2APX8 Gm12566-201ENSMUST00000121479 359 ntBASIC12.76□□□□□ -0.37
Scn1aA2APX8 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Scn1aA2APX8 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn1aA2APX8 Mir3102-201ENSMUST00000175555 104 ntBASIC12.76□□□□□ -0.37
Scn1aA2APX8 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Scn1aA2APX8 Gm19353-201ENSMUST00000184561 445 ntBASIC12.76□□□□□ -0.37
Scn1aA2APX8 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Scn1aA2APX8 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Scn1aA2APX8 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Scn1aA2APX8 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.76□□□□□ -0.37
Scn1aA2APX8 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Scn1aA2APX8 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Scn1aA2APX8 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Scn1aA2APX8 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.76□□□□□ -0.37
Scn1aA2APX8 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn1aA2APX8 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn1aA2APX8 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn1aA2APX8 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Scn1aA2APX8 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Scn1aA2APX8 Gm9333-201ENSMUST00000205452 1323 ntBASIC12.76□□□□□ -0.37
Scn1aA2APX8 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn1aA2APX8 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.76□□□□□ -0.37
Scn1aA2APX8 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Scn1aA2APX8 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn1aA2APX8 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Scn1aA2APX8 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn1aA2APX8 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn1aA2APX8 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn1aA2APX8 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC12.76□□□□□ -0.37
Scn1aA2APX8 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.76□□□□□ -0.37
Scn1aA2APX8 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Scn1aA2APX8 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Scn1aA2APX8 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.76□□□□□ -0.37
Scn1aA2APX8 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.76□□□□□ -0.37
Scn1aA2APX8 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn1aA2APX8 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.76□□□□□ -0.37
Scn1aA2APX8 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms