Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cfap99A0A140LIX9 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cfap99A0A140LIX9 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cfap99A0A140LIX9 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Cfap99A0A140LIX9 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cfap99A0A140LIX9 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cfap99A0A140LIX9 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cfap99A0A140LIX9 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cfap99A0A140LIX9 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.68□□□□□ -0.06
Cfap99A0A140LIX9 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cfap99A0A140LIX9 Gm37391-201ENSMUST00000194891 2318 ntBASIC14.68□□□□□ -0.06
Cfap99A0A140LIX9 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cfap99A0A140LIX9 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
Cfap99A0A140LIX9 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC14.68□□□□□ -0.06
Cfap99A0A140LIX9 Gm12286-201ENSMUST00000119246 1002 ntBASIC14.68□□□□□ -0.06
Cfap99A0A140LIX9 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
Cfap99A0A140LIX9 Gm12266-201ENSMUST00000120311 962 ntBASIC14.68□□□□□ -0.06
Cfap99A0A140LIX9 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC14.68□□□□□ -0.06
Cfap99A0A140LIX9 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC14.68□□□□□ -0.06
Cfap99A0A140LIX9 Gm20426-201ENSMUST00000173657 440 ntBASIC14.68□□□□□ -0.06
Cfap99A0A140LIX9 Gm5070-201ENSMUST00000177599 862 ntBASIC14.68□□□□□ -0.06
Cfap99A0A140LIX9 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cfap99A0A140LIX9 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC14.68□□□□□ -0.06
Cfap99A0A140LIX9 Gm45224-201ENSMUST00000208203 414 ntBASIC14.68□□□□□ -0.06
Cfap99A0A140LIX9 AC169036.1-201ENSMUST00000227994 296 ntBASIC14.68□□□□□ -0.06
Cfap99A0A140LIX9 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cfap99A0A140LIX9 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cfap99A0A140LIX9 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Cfap99A0A140LIX9 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cfap99A0A140LIX9 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cfap99A0A140LIX9 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Cfap99A0A140LIX9 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Cfap99A0A140LIX9 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cfap99A0A140LIX9 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cfap99A0A140LIX9 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cfap99A0A140LIX9 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cfap99A0A140LIX9 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cfap99A0A140LIX9 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cfap99A0A140LIX9 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cfap99A0A140LIX9 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cfap99A0A140LIX9 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC14.68□□□□□ -0.06
Cfap99A0A140LIX9 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cfap99A0A140LIX9 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Cfap99A0A140LIX9 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC14.67□□□□□ -0.06
Cfap99A0A140LIX9 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cfap99A0A140LIX9 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cfap99A0A140LIX9 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cfap99A0A140LIX9 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cfap99A0A140LIX9 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cfap99A0A140LIX9 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cfap99A0A140LIX9 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Cfap99A0A140LIX9 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cfap99A0A140LIX9 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cfap99A0A140LIX9 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cfap99A0A140LIX9 Gm12616-201ENSMUST00000118594 382 ntBASIC14.67□□□□□ -0.06
Cfap99A0A140LIX9 Gm14999-201ENSMUST00000121039 624 ntBASIC14.67□□□□□ -0.06
Cfap99A0A140LIX9 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cfap99A0A140LIX9 Gm6963-201ENSMUST00000147879 379 ntBASIC14.67□□□□□ -0.06
Cfap99A0A140LIX9 Gm12624-201ENSMUST00000177615 382 ntBASIC14.67□□□□□ -0.06
Cfap99A0A140LIX9 Gm12621-201ENSMUST00000177760 382 ntBASIC14.67□□□□□ -0.06
Cfap99A0A140LIX9 Gm12615-201ENSMUST00000177970 382 ntBASIC14.67□□□□□ -0.06
Cfap99A0A140LIX9 Gm12622-201ENSMUST00000177975 382 ntBASIC14.67□□□□□ -0.06
Cfap99A0A140LIX9 Gm12627-201ENSMUST00000178412 382 ntBASIC14.67□□□□□ -0.06
Cfap99A0A140LIX9 Gm12625-201ENSMUST00000179122 382 ntBASIC14.67□□□□□ -0.06
Cfap99A0A140LIX9 Gm12614-201ENSMUST00000179586 382 ntBASIC14.67□□□□□ -0.06
Cfap99A0A140LIX9 Gm12613-201ENSMUST00000180323 382 ntBASIC14.67□□□□□ -0.06
Cfap99A0A140LIX9 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cfap99A0A140LIX9 Gm18730-201ENSMUST00000218038 343 ntBASIC14.67□□□□□ -0.06
Cfap99A0A140LIX9 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cfap99A0A140LIX9 AC153974.2-201ENSMUST00000218577 1025 ntBASIC14.67□□□□□ -0.06
Cfap99A0A140LIX9 Gm26035-201ENSMUST00000083065 308 ntBASIC14.67□□□□□ -0.06
Cfap99A0A140LIX9 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cfap99A0A140LIX9 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cfap99A0A140LIX9 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cfap99A0A140LIX9 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cfap99A0A140LIX9 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cfap99A0A140LIX9 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
Cfap99A0A140LIX9 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cfap99A0A140LIX9 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cfap99A0A140LIX9 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cfap99A0A140LIX9 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cfap99A0A140LIX9 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cfap99A0A140LIX9 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cfap99A0A140LIX9 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cfap99A0A140LIX9 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cfap99A0A140LIX9 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cfap99A0A140LIX9 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cfap99A0A140LIX9 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cfap99A0A140LIX9 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC14.66□□□□□ -0.06
Cfap99A0A140LIX9 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cfap99A0A140LIX9 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cfap99A0A140LIX9 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cfap99A0A140LIX9 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Cfap99A0A140LIX9 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cfap99A0A140LIX9 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC14.66□□□□□ -0.06
Cfap99A0A140LIX9 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cfap99A0A140LIX9 Gm5884-201ENSMUST00000036712 1479 ntBASIC14.66□□□□□ -0.06
Cfap99A0A140LIX9 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
Cfap99A0A140LIX9 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Cfap99A0A140LIX9 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms