Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC9.32□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav3n-3A0A0G2JEM0 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav3n-3A0A0G2JEM0 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC9.31□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC9.31□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC9.31□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3n-3A0A0G2JEM0 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Gm6092-201ENSMUST00000121659 2029 ntBASIC9.31□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Olfr463-202ENSMUST00000215150 2031 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
Trav3n-3A0A0G2JEM0 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Nufip2-204ENSMUST00000181023 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC9.31□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC9.31□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Gm12416-201ENSMUST00000120911 1008 ntBASIC9.31□□□□□ -0.92
Trav3n-3A0A0G2JEM0 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC9.31□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC9.31□□□□□ -0.92
Trav3n-3A0A0G2JEM0 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Gm27989-201ENSMUST00000184721 107 ntBASIC9.31□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Gm28760-201ENSMUST00000185995 736 ntBASIC9.31□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC9.31□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC9.31□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC9.31□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC9.31□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trav3n-3A0A0G2JEM0 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Gm6447-201ENSMUST00000118905 835 ntBASIC9.3□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Gm15376-201ENSMUST00000122258 783 ntBASIC9.3□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC9.3□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC9.3□□□□□ -0.92
Trav3n-3A0A0G2JEM0 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC9.3□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC9.3□□□□□ -0.92
Trav3n-3A0A0G2JEM0 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC9.3□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC9.3□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trav3n-3A0A0G2JEM0 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms