Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Trav6n-6A0A075B6B2 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav6n-6A0A075B6B2 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC9.18□□□□□ -0.94
Trav6n-6A0A075B6B2 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm42599-201ENSMUST00000201308 469 ntBASIC9.18□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Trav6n-6A0A075B6B2 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC9.18□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC9.18□□□□□ -0.94
Trav6n-6A0A075B6B2 AC154276.1-201ENSMUST00000228874 1299 ntBASIC9.18□□□□□ -0.94
Trav6n-6A0A075B6B2 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav6n-6A0A075B6B2 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav6n-6A0A075B6B2 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav6n-6A0A075B6B2 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav6n-6A0A075B6B2 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Trav6n-6A0A075B6B2 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC9.18□□□□□ -0.94
Trav6n-6A0A075B6B2 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav6n-6A0A075B6B2 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm38292-201ENSMUST00000192646 3045 ntBASIC9.18□□□□□ -0.94
Trav6n-6A0A075B6B2 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav6n-6A0A075B6B2 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav6n-6A0A075B6B2 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav6n-6A0A075B6B2 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Trav6n-6A0A075B6B2 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Trav6n-6A0A075B6B2 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav6n-6A0A075B6B2 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav6n-6A0A075B6B2 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm42141-201ENSMUST00000196534 2172 ntBASIC9.17□□□□□ -0.94
Trav6n-6A0A075B6B2 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav6n-6A0A075B6B2 Abhd6-203ENSMUST00000225234 1958 ntBASIC9.17□□□□□ -0.94
Trav6n-6A0A075B6B2 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav6n-6A0A075B6B2 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav6n-6A0A075B6B2 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC9.17□□□□□ -0.94
Trav6n-6A0A075B6B2 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav6n-6A0A075B6B2 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm10040-201ENSMUST00000080726 1662 ntBASIC9.17□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm37368-201ENSMUST00000193173 3212 ntBASIC9.17□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm10686-201ENSMUST00000215389 3247 ntBASIC9.17□□□□□ -0.94
Trav6n-6A0A075B6B2 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav6n-6A0A075B6B2 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC9.17□□□□□ -0.94
Trav6n-6A0A075B6B2 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC9.17□□□□□ -0.94
Trav6n-6A0A075B6B2 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav6n-6A0A075B6B2 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav6n-6A0A075B6B2 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav6n-6A0A075B6B2 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav6n-6A0A075B6B2 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav6n-6A0A075B6B2 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav6n-6A0A075B6B2 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Trav6n-6A0A075B6B2 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC9.17□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm15824-201ENSMUST00000119516 955 ntBASIC9.17□□□□□ -0.94
Trav6n-6A0A075B6B2 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC9.17□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC9.17□□□□□ -0.94
Trav6n-6A0A075B6B2 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Trav6n-6A0A075B6B2 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Trav6n-6A0A075B6B2 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC9.17□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm18187-201ENSMUST00000196476 984 ntBASIC9.17□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC9.17□□□□□ -0.94
Trav6n-6A0A075B6B2 AC134335.2-201ENSMUST00000227660 440 ntBASIC9.17□□□□□ -0.94
Trav6n-6A0A075B6B2 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav6n-6A0A075B6B2 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav6n-6A0A075B6B2 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Trav6n-6A0A075B6B2 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav6n-6A0A075B6B2 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm9466-201ENSMUST00000218144 2246 ntBASIC9.17□□□□□ -0.94
Trav6n-6A0A075B6B2 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC9.17□□□□□ -0.94
Trav6n-6A0A075B6B2 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm2420-201ENSMUST00000119864 2149 ntBASIC9.17□□□□□ -0.94
Trav6n-6A0A075B6B2 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Trav6n-6A0A075B6B2 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav6n-6A0A075B6B2 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Trav6n-6A0A075B6B2 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Trav6n-6A0A075B6B2 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Trav6n-6A0A075B6B2 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav6n-6A0A075B6B2 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Trav6n-6A0A075B6B2 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Trav6n-6A0A075B6B2 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC9.17□□□□□ -0.94
Trav6n-6A0A075B6B2 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav6n-6A0A075B6B2 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav6n-6A0A075B6B2 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC9.16□□□□□ -0.94
Trav6n-6A0A075B6B2 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC9.16□□□□□ -0.94
Trav6n-6A0A075B6B2 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Trav6n-6A0A075B6B2 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav6n-6A0A075B6B2 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC9.16□□□□□ -0.94
Trav6n-6A0A075B6B2 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Trav6n-6A0A075B6B2 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav6n-6A0A075B6B2 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav6n-6A0A075B6B2 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Trav6n-6A0A075B6B2 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav6n-6A0A075B6B2 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav6n-6A0A075B6B2 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav6n-6A0A075B6B2 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm37931-201ENSMUST00000194686 2866 ntBASIC9.16□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Trav6n-6A0A075B6B2 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav6n-6A0A075B6B2 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Trav6n-6A0A075B6B2 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC9.16□□□□□ -0.94
Trav6n-6A0A075B6B2 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav6n-6A0A075B6B2 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms