Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav18A0A075B656 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav18A0A075B656 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav18A0A075B656 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav18A0A075B656 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav18A0A075B656 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav18A0A075B656 Gm8793-201ENSMUST00000183069 1303 ntBASIC10.06□□□□□ -0.8
Trav18A0A075B656 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav18A0A075B656 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav18A0A075B656 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav18A0A075B656 Gm6211-201ENSMUST00000147973 4275 ntBASIC10.05□□□□□ -0.8
Trav18A0A075B656 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav18A0A075B656 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC10.05□□□□□ -0.8
Trav18A0A075B656 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav18A0A075B656 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav18A0A075B656 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav18A0A075B656 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC10.05□□□□□ -0.8
Trav18A0A075B656 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav18A0A075B656 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav18A0A075B656 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav18A0A075B656 AC122860.2-201ENSMUST00000217967 2671 ntBASIC10.05□□□□□ -0.8
Trav18A0A075B656 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav18A0A075B656 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav18A0A075B656 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav18A0A075B656 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC10.05□□□□□ -0.8
Trav18A0A075B656 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Trav18A0A075B656 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav18A0A075B656 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav18A0A075B656 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav18A0A075B656 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC10.05□□□□□ -0.8
Trav18A0A075B656 Gm23119-201ENSMUST00000158610 140 ntBASIC10.05□□□□□ -0.8
Trav18A0A075B656 Gm8738-201ENSMUST00000172606 329 ntBASIC10.05□□□□□ -0.8
Trav18A0A075B656 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Trav18A0A075B656 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav18A0A075B656 Gm29127-201ENSMUST00000188304 517 ntBASIC10.05□□□□□ -0.8
Trav18A0A075B656 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC10.05□□□□□ -0.8
Trav18A0A075B656 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC10.05□□□□□ -0.8
Trav18A0A075B656 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav18A0A075B656 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav18A0A075B656 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC10.05□□□□□ -0.8
Trav18A0A075B656 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav18A0A075B656 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav18A0A075B656 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav18A0A075B656 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Trav18A0A075B656 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav18A0A075B656 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav18A0A075B656 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav18A0A075B656 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav18A0A075B656 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav18A0A075B656 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav18A0A075B656 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav18A0A075B656 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav18A0A075B656 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav18A0A075B656 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
Trav18A0A075B656 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav18A0A075B656 Gm5620-201ENSMUST00000077991 1348 ntBASIC10.05□□□□□ -0.8
Trav18A0A075B656 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav18A0A075B656 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav18A0A075B656 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav18A0A075B656 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav18A0A075B656 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav18A0A075B656 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav18A0A075B656 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC10.04□□□□□ -0.8
Trav18A0A075B656 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
Trav18A0A075B656 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav18A0A075B656 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav18A0A075B656 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav18A0A075B656 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Trav18A0A075B656 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Trav18A0A075B656 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Trav18A0A075B656 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav18A0A075B656 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav18A0A075B656 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav18A0A075B656 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC10.04□□□□□ -0.8
Trav18A0A075B656 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav18A0A075B656 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav18A0A075B656 Gm18304-201ENSMUST00000189162 546 ntBASIC10.04□□□□□ -0.8
Trav18A0A075B656 Gm44405-201ENSMUST00000198952 126 ntBASIC10.04□□□□□ -0.8
Trav18A0A075B656 Gm18584-201ENSMUST00000203098 964 ntBASIC10.04□□□□□ -0.8
Trav18A0A075B656 Gm9299-201ENSMUST00000206392 1140 ntBASIC10.04□□□□□ -0.8
Trav18A0A075B656 AC125209.1-201ENSMUST00000225812 766 ntBASIC10.04□□□□□ -0.8
Trav18A0A075B656 Wdyhv1-206ENSMUST00000227142 786 ntBASIC10.04□□□□□ -0.8
Trav18A0A075B656 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav18A0A075B656 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav18A0A075B656 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav18A0A075B656 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav18A0A075B656 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav18A0A075B656 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav18A0A075B656 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav18A0A075B656 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav18A0A075B656 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav18A0A075B656 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC10.04□□□□□ -0.8
Trav18A0A075B656 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav18A0A075B656 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav18A0A075B656 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav18A0A075B656 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav18A0A075B656 Arhgef3-204ENSMUST00000225949 3198 ntBASIC10.04□□□□□ -0.8
Trav18A0A075B656 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav18A0A075B656 AC130671.2-201ENSMUST00000227224 1621 ntBASIC10.04□□□□□ -0.8
Trav18A0A075B656 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms