Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC10.31□□□□□ -0.76
Trav5-4A0A075B652 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5-4A0A075B652 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5-4A0A075B652 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5-4A0A075B652 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5-4A0A075B652 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5-4A0A075B652 Gm18227-201ENSMUST00000211082 1468 ntBASIC10.31□□□□□ -0.76
Trav5-4A0A075B652 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Trav5-4A0A075B652 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5-4A0A075B652 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5-4A0A075B652 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5-4A0A075B652 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5-4A0A075B652 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Trav5-4A0A075B652 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC10.31□□□□□ -0.76
Trav5-4A0A075B652 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5-4A0A075B652 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5-4A0A075B652 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5-4A0A075B652 Gm4984-201ENSMUST00000115987 360 ntBASIC10.31□□□□□ -0.76
Trav5-4A0A075B652 Gm15703-201ENSMUST00000120250 880 ntBASIC10.31□□□□□ -0.76
Trav5-4A0A075B652 Gm16177-201ENSMUST00000120728 718 ntBASIC10.31□□□□□ -0.76
Trav5-4A0A075B652 Gm1335-201ENSMUST00000121653 386 ntBASIC10.31□□□□□ -0.76
Trav5-4A0A075B652 Gm14760-201ENSMUST00000121831 999 ntBASIC10.31□□□□□ -0.76
Trav5-4A0A075B652 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5-4A0A075B652 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5-4A0A075B652 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5-4A0A075B652 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5-4A0A075B652 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC10.31□□□□□ -0.76
Trav5-4A0A075B652 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Trav5-4A0A075B652 Gm26927-201ENSMUST00000182385 965 ntBASIC10.31□□□□□ -0.76
Trav5-4A0A075B652 Gm38092-201ENSMUST00000195600 653 ntBASIC10.31□□□□□ -0.76
Trav5-4A0A075B652 Gm43818-201ENSMUST00000200605 466 ntBASIC10.31□□□□□ -0.76
Trav5-4A0A075B652 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC10.31□□□□□ -0.76
Trav5-4A0A075B652 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC10.31□□□□□ -0.76
Trav5-4A0A075B652 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC10.31□□□□□ -0.76
Trav5-4A0A075B652 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5-4A0A075B652 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5-4A0A075B652 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5-4A0A075B652 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5-4A0A075B652 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5-4A0A075B652 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5-4A0A075B652 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5-4A0A075B652 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5-4A0A075B652 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5-4A0A075B652 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC10.31□□□□□ -0.76
Trav5-4A0A075B652 AC129336.1-201ENSMUST00000220224 2277 ntBASIC10.31□□□□□ -0.76
Trav5-4A0A075B652 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5-4A0A075B652 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5-4A0A075B652 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav5-4A0A075B652 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC10.31□□□□□ -0.76
Trav5-4A0A075B652 Gm8131-201ENSMUST00000213783 1570 ntBASIC10.31□□□□□ -0.76
Trav5-4A0A075B652 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC10.3□□□□□ -0.76
Trav5-4A0A075B652 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5-4A0A075B652 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC10.3□□□□□ -0.76
Trav5-4A0A075B652 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5-4A0A075B652 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Trav5-4A0A075B652 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5-4A0A075B652 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5-4A0A075B652 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5-4A0A075B652 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5-4A0A075B652 Gm43075-201ENSMUST00000198613 3905 ntBASIC10.3□□□□□ -0.76
Trav5-4A0A075B652 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC10.3□□□□□ -0.76
Trav5-4A0A075B652 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC10.3□□□□□ -0.76
Trav5-4A0A075B652 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
Trav5-4A0A075B652 Gm11424-201ENSMUST00000121929 829 ntBASIC10.3□□□□□ -0.76
Trav5-4A0A075B652 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC10.3□□□□□ -0.76
Trav5-4A0A075B652 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC10.3□□□□□ -0.76
Trav5-4A0A075B652 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5-4A0A075B652 Rmrp-201ENSMUST00000157463 271 ntBASIC10.3□□□□□ -0.76
Trav5-4A0A075B652 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Trav5-4A0A075B652 Gm27682-201ENSMUST00000183930 110 ntBASIC10.3□□□□□ -0.76
Trav5-4A0A075B652 Gm38230-201ENSMUST00000193572 1159 ntBASIC10.3□□□□□ -0.76
Trav5-4A0A075B652 Gm9299-201ENSMUST00000206392 1140 ntBASIC10.3□□□□□ -0.76
Trav5-4A0A075B652 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5-4A0A075B652 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5-4A0A075B652 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC10.3□□□□□ -0.76
Trav5-4A0A075B652 AL732506.1-201ENSMUST00000226420 281 ntBASIC10.3□□□□□ -0.76
Trav5-4A0A075B652 AC022775.2-201ENSMUST00000227885 646 ntBASIC10.3□□□□□ -0.76
Trav5-4A0A075B652 AC167013.1-201ENSMUST00000228592 202 ntBASIC10.3□□□□□ -0.76
Trav5-4A0A075B652 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5-4A0A075B652 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5-4A0A075B652 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5-4A0A075B652 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5-4A0A075B652 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5-4A0A075B652 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5-4A0A075B652 Gm10339-203ENSMUST00000225409 1671 ntBASIC10.3□□□□□ -0.76
Trav5-4A0A075B652 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5-4A0A075B652 Gm18983-201ENSMUST00000222884 2729 ntBASIC10.3□□□□□ -0.76
Trav5-4A0A075B652 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5-4A0A075B652 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Trav5-4A0A075B652 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5-4A0A075B652 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5-4A0A075B652 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5-4A0A075B652 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5-4A0A075B652 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5-4A0A075B652 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5-4A0A075B652 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC10.3□□□□□ -0.76
Trav5-4A0A075B652 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5-4A0A075B652 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5-4A0A075B652 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5-4A0A075B652 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms