Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trav8-1A0A075B641 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trav8-1A0A075B641 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trav8-1A0A075B641 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Trav8-1A0A075B641 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trav8-1A0A075B641 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Trav8-1A0A075B641 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trav8-1A0A075B641 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC8.77□□□□□ -1.01
Trav8-1A0A075B641 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC8.77□□□□□ -1.01
Trav8-1A0A075B641 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC8.77□□□□□ -1.01
Trav8-1A0A075B641 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC8.77□□□□□ -1.01
Trav8-1A0A075B641 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC8.77□□□□□ -1.01
Trav8-1A0A075B641 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC8.77□□□□□ -1.01
Trav8-1A0A075B641 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Trav8-1A0A075B641 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC8.77□□□□□ -1.01
Trav8-1A0A075B641 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC8.77□□□□□ -1.01
Trav8-1A0A075B641 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trav8-1A0A075B641 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trav8-1A0A075B641 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trav8-1A0A075B641 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trav8-1A0A075B641 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Trav8-1A0A075B641 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trav8-1A0A075B641 Rgr-203ENSMUST00000225070 4704 ntBASIC8.77□□□□□ -1.01
Trav8-1A0A075B641 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Trav8-1A0A075B641 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Trav8-1A0A075B641 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Trav8-1A0A075B641 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC8.77□□□□□ -1.01
Trav8-1A0A075B641 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trav8-1A0A075B641 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trav8-1A0A075B641 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trav8-1A0A075B641 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trav8-1A0A075B641 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Trav8-1A0A075B641 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trav8-1A0A075B641 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trav8-1A0A075B641 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trav8-1A0A075B641 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trav8-1A0A075B641 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trav8-1A0A075B641 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trav8-1A0A075B641 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC8.77□□□□□ -1.01
Trav8-1A0A075B641 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Trav8-1A0A075B641 Gm43172-201ENSMUST00000202139 2137 ntBASIC8.77□□□□□ -1.01
Trav8-1A0A075B641 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Trav8-1A0A075B641 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trav8-1A0A075B641 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC8.77□□□□□ -1.01
Trav8-1A0A075B641 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Trav8-1A0A075B641 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 Kmt2a-202ENSMUST00000114689 16470 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 Gm43858-201ENSMUST00000199418 1778 ntBASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 Gm7642-201ENSMUST00000216345 1809 ntBASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 Gm4995-201ENSMUST00000117247 432 ntBASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 Gm24513-201ENSMUST00000174964 138 ntBASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 Gm27430-201ENSMUST00000184585 107 ntBASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 Gm27397-201ENSMUST00000184997 107 ntBASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 Gm44333-201ENSMUST00000197168 107 ntBASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 Gm5312-201ENSMUST00000203728 547 ntBASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 Gm44771-201ENSMUST00000206975 626 ntBASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 Slc45a4-207ENSMUST00000151288 7509 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
Trav8-1A0A075B641 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms