Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC9.26□□□□□ -0.93
Trav7n-4A0A075B620 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC9.25□□□□□ -0.93
Trav7n-4A0A075B620 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav7n-4A0A075B620 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav7n-4A0A075B620 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav7n-4A0A075B620 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav7n-4A0A075B620 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav7n-4A0A075B620 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav7n-4A0A075B620 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav7n-4A0A075B620 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav7n-4A0A075B620 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Trav7n-4A0A075B620 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav7n-4A0A075B620 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Trav7n-4A0A075B620 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav7n-4A0A075B620 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC9.25□□□□□ -0.93
Trav7n-4A0A075B620 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Trav7n-4A0A075B620 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Trav7n-4A0A075B620 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Trav7n-4A0A075B620 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
Trav7n-4A0A075B620 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Trav7n-4A0A075B620 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Trav7n-4A0A075B620 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Trav7n-4A0A075B620 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav7n-4A0A075B620 AC108858.2-201ENSMUST00000228186 1425 ntBASIC9.25□□□□□ -0.93
Trav7n-4A0A075B620 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Trav7n-4A0A075B620 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav7n-4A0A075B620 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav7n-4A0A075B620 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav7n-4A0A075B620 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav7n-4A0A075B620 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC9.25□□□□□ -0.93
Trav7n-4A0A075B620 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC9.25□□□□□ -0.93
Trav7n-4A0A075B620 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC9.25□□□□□ -0.93
Trav7n-4A0A075B620 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC9.25□□□□□ -0.93
Trav7n-4A0A075B620 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Trav7n-4A0A075B620 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav7n-4A0A075B620 Gm23363-201ENSMUST00000175024 79 ntBASIC9.25□□□□□ -0.93
Trav7n-4A0A075B620 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC9.25□□□□□ -0.93
Trav7n-4A0A075B620 AW822252-206ENSMUST00000208904 237 ntBASIC9.25□□□□□ -0.93
Trav7n-4A0A075B620 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav7n-4A0A075B620 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC9.25□□□□□ -0.93
Trav7n-4A0A075B620 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav7n-4A0A075B620 AC155258.1-201ENSMUST00000219303 253 ntBASIC9.25□□□□□ -0.93
Trav7n-4A0A075B620 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC9.25□□□□□ -0.93
Trav7n-4A0A075B620 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav7n-4A0A075B620 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav7n-4A0A075B620 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav7n-4A0A075B620 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC9.25□□□□□ -0.93
Trav7n-4A0A075B620 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav7n-4A0A075B620 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav7n-4A0A075B620 Gm40377-201ENSMUST00000204604 2015 ntBASIC9.25□□□□□ -0.93
Trav7n-4A0A075B620 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Trav7n-4A0A075B620 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Trav7n-4A0A075B620 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav7n-4A0A075B620 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC9.25□□□□□ -0.93
Trav7n-4A0A075B620 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav7n-4A0A075B620 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav7n-4A0A075B620 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav7n-4A0A075B620 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav7n-4A0A075B620 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav7n-4A0A075B620 Gm38292-201ENSMUST00000192646 3045 ntBASIC9.25□□□□□ -0.93
Trav7n-4A0A075B620 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trav7n-4A0A075B620 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Trav7n-4A0A075B620 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Trav7n-4A0A075B620 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Trav7n-4A0A075B620 Gm38049-201ENSMUST00000195698 1372 ntBASIC9.24□□□□□ -0.93
Trav7n-4A0A075B620 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC9.24□□□□□ -0.93
Trav7n-4A0A075B620 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav7n-4A0A075B620 Gm45532-201ENSMUST00000210342 3620 ntBASIC9.24□□□□□ -0.93
Trav7n-4A0A075B620 Gm9466-201ENSMUST00000218144 2246 ntBASIC9.24□□□□□ -0.93
Trav7n-4A0A075B620 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Trav7n-4A0A075B620 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav7n-4A0A075B620 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Trav7n-4A0A075B620 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav7n-4A0A075B620 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav7n-4A0A075B620 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC9.24□□□□□ -0.93
Trav7n-4A0A075B620 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav7n-4A0A075B620 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav7n-4A0A075B620 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav7n-4A0A075B620 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Trav7n-4A0A075B620 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC9.24□□□□□ -0.93
Trav7n-4A0A075B620 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav7n-4A0A075B620 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC9.24□□□□□ -0.93
Trav7n-4A0A075B620 Gm15371-201ENSMUST00000117057 784 ntBASIC9.24□□□□□ -0.93
Trav7n-4A0A075B620 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC9.24□□□□□ -0.93
Trav7n-4A0A075B620 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Trav7n-4A0A075B620 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC9.24□□□□□ -0.93
Trav7n-4A0A075B620 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Trav7n-4A0A075B620 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Trav7n-4A0A075B620 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC9.24□□□□□ -0.93
Trav7n-4A0A075B620 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav7n-4A0A075B620 Gm2756-201ENSMUST00000195851 400 ntBASIC9.24□□□□□ -0.93
Trav7n-4A0A075B620 Gm2213-201ENSMUST00000197485 688 ntBASIC9.24□□□□□ -0.93
Trav7n-4A0A075B620 Gm6888-201ENSMUST00000221983 706 ntBASIC9.24□□□□□ -0.93
Trav7n-4A0A075B620 AC165260.3-202ENSMUST00000224550 1031 ntBASIC9.24□□□□□ -0.93
Trav7n-4A0A075B620 AC225888.1-201ENSMUST00000227184 728 ntBASIC9.24□□□□□ -0.93
Trav7n-4A0A075B620 AC192088.1-201ENSMUST00000227561 301 ntBASIC9.24□□□□□ -0.93
Trav7n-4A0A075B620 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Trav7n-4A0A075B620 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Trav7n-4A0A075B620 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Trav7n-4A0A075B620 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms