Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.07□□□□□ -0.64
H2afb3S4R1G7 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
H2afb3S4R1G7 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
H2afb3S4R1G7 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
H2afb3S4R1G7 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.07□□□□□ -0.64
H2afb3S4R1G7 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.07□□□□□ -0.64
H2afb3S4R1G7 Gm7029-201ENSMUST00000173226 450 ntBASIC11.07□□□□□ -0.64
H2afb3S4R1G7 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
H2afb3S4R1G7 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11.07□□□□□ -0.64
H2afb3S4R1G7 Gm7063-201ENSMUST00000186840 981 ntBASIC11.07□□□□□ -0.64
H2afb3S4R1G7 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
H2afb3S4R1G7 Gm6007-201ENSMUST00000208170 823 ntBASIC11.07□□□□□ -0.64
H2afb3S4R1G7 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.07□□□□□ -0.64
H2afb3S4R1G7 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
H2afb3S4R1G7 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
H2afb3S4R1G7 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
H2afb3S4R1G7 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
H2afb3S4R1G7 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
H2afb3S4R1G7 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
H2afb3S4R1G7 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
H2afb3S4R1G7 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
H2afb3S4R1G7 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
H2afb3S4R1G7 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
H2afb3S4R1G7 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
H2afb3S4R1G7 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
H2afb3S4R1G7 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
H2afb3S4R1G7 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
H2afb3S4R1G7 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
H2afb3S4R1G7 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
H2afb3S4R1G7 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
H2afb3S4R1G7 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
H2afb3S4R1G7 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
H2afb3S4R1G7 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
H2afb3S4R1G7 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
H2afb3S4R1G7 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb3S4R1G7 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb3S4R1G7 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.06□□□□□ -0.64
H2afb3S4R1G7 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb3S4R1G7 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.06□□□□□ -0.64
H2afb3S4R1G7 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb3S4R1G7 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb3S4R1G7 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb3S4R1G7 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.06□□□□□ -0.64
H2afb3S4R1G7 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb3S4R1G7 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.06□□□□□ -0.64
H2afb3S4R1G7 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb3S4R1G7 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.06□□□□□ -0.64
H2afb3S4R1G7 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC11.06□□□□□ -0.64
H2afb3S4R1G7 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb3S4R1G7 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
H2afb3S4R1G7 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb3S4R1G7 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb3S4R1G7 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb3S4R1G7 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
H2afb3S4R1G7 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb3S4R1G7 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.06□□□□□ -0.64
H2afb3S4R1G7 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.06□□□□□ -0.64
H2afb3S4R1G7 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb3S4R1G7 Gm43818-201ENSMUST00000200605 466 ntBASIC11.06□□□□□ -0.64
H2afb3S4R1G7 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb3S4R1G7 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.06□□□□□ -0.64
H2afb3S4R1G7 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.06□□□□□ -0.64
H2afb3S4R1G7 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.06□□□□□ -0.64
H2afb3S4R1G7 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.06□□□□□ -0.64
H2afb3S4R1G7 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb3S4R1G7 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb3S4R1G7 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
H2afb3S4R1G7 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb3S4R1G7 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
H2afb3S4R1G7 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
H2afb3S4R1G7 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb3S4R1G7 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb3S4R1G7 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb3S4R1G7 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb3S4R1G7 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
H2afb3S4R1G7 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
H2afb3S4R1G7 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb3S4R1G7 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb3S4R1G7 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb3S4R1G7 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb3S4R1G7 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb3S4R1G7 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb3S4R1G7 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.06□□□□□ -0.64
H2afb3S4R1G7 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
H2afb3S4R1G7 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb3S4R1G7 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
H2afb3S4R1G7 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
H2afb3S4R1G7 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb3S4R1G7 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb3S4R1G7 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb3S4R1G7 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb3S4R1G7 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb3S4R1G7 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb3S4R1G7 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb3S4R1G7 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb3S4R1G7 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
H2afb3S4R1G7 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
H2afb3S4R1G7 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb3S4R1G7 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb3S4R1G7 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms