Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim3Q9R1R2 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trim3Q9R1R2 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim3Q9R1R2 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim3Q9R1R2 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim3Q9R1R2 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim3Q9R1R2 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Trim3Q9R1R2 Mospd4-201ENSMUST00000180618 576 ntBASIC11.59□□□□□ -0.55
Trim3Q9R1R2 Gm27516-201ENSMUST00000184237 98 ntBASIC11.59□□□□□ -0.55
Trim3Q9R1R2 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.59□□□□□ -0.55
Trim3Q9R1R2 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim3Q9R1R2 Gm38092-201ENSMUST00000195600 653 ntBASIC11.59□□□□□ -0.55
Trim3Q9R1R2 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trim3Q9R1R2 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim3Q9R1R2 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.59□□□□□ -0.55
Trim3Q9R1R2 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim3Q9R1R2 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.59□□□□□ -0.55
Trim3Q9R1R2 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim3Q9R1R2 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim3Q9R1R2 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trim3Q9R1R2 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim3Q9R1R2 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim3Q9R1R2 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim3Q9R1R2 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim3Q9R1R2 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trim3Q9R1R2 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim3Q9R1R2 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim3Q9R1R2 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Trim3Q9R1R2 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim3Q9R1R2 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim3Q9R1R2 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim3Q9R1R2 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim3Q9R1R2 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim3Q9R1R2 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim3Q9R1R2 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim3Q9R1R2 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim3Q9R1R2 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim3Q9R1R2 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim3Q9R1R2 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.58□□□□□ -0.55
Trim3Q9R1R2 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim3Q9R1R2 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Trim3Q9R1R2 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim3Q9R1R2 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim3Q9R1R2 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim3Q9R1R2 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim3Q9R1R2 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim3Q9R1R2 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim3Q9R1R2 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Trim3Q9R1R2 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim3Q9R1R2 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim3Q9R1R2 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim3Q9R1R2 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.58□□□□□ -0.56
Trim3Q9R1R2 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim3Q9R1R2 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.58□□□□□ -0.56
Trim3Q9R1R2 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim3Q9R1R2 Mir6420-201ENSMUST00000185032 102 ntBASIC11.58□□□□□ -0.56
Trim3Q9R1R2 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.58□□□□□ -0.56
Trim3Q9R1R2 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Trim3Q9R1R2 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC11.58□□□□□ -0.56
Trim3Q9R1R2 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.58□□□□□ -0.56
Trim3Q9R1R2 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.58□□□□□ -0.56
Trim3Q9R1R2 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.58□□□□□ -0.56
Trim3Q9R1R2 Gm7046-201ENSMUST00000221351 977 ntBASIC11.58□□□□□ -0.56
Trim3Q9R1R2 Gm8227-201ENSMUST00000223306 571 ntBASIC11.58□□□□□ -0.56
Trim3Q9R1R2 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim3Q9R1R2 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim3Q9R1R2 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim3Q9R1R2 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim3Q9R1R2 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Trim3Q9R1R2 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trim3Q9R1R2 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim3Q9R1R2 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim3Q9R1R2 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.58□□□□□ -0.56
Trim3Q9R1R2 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim3Q9R1R2 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.58□□□□□ -0.56
Trim3Q9R1R2 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim3Q9R1R2 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim3Q9R1R2 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim3Q9R1R2 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim3Q9R1R2 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim3Q9R1R2 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim3Q9R1R2 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim3Q9R1R2 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim3Q9R1R2 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim3Q9R1R2 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim3Q9R1R2 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim3Q9R1R2 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Trim3Q9R1R2 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim3Q9R1R2 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim3Q9R1R2 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.57□□□□□ -0.56
Trim3Q9R1R2 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.57□□□□□ -0.56
Trim3Q9R1R2 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim3Q9R1R2 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim3Q9R1R2 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Trim3Q9R1R2 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim3Q9R1R2 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim3Q9R1R2 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Trim3Q9R1R2 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim3Q9R1R2 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
Trim3Q9R1R2 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms