Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RpgrQ9R0X5 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RpgrQ9R0X5 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RpgrQ9R0X5 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RpgrQ9R0X5 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.53□□□□□ -0.4
RpgrQ9R0X5 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
RpgrQ9R0X5 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RpgrQ9R0X5 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RpgrQ9R0X5 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RpgrQ9R0X5 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RpgrQ9R0X5 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.53□□□□□ -0.4
RpgrQ9R0X5 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
RpgrQ9R0X5 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
RpgrQ9R0X5 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
RpgrQ9R0X5 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
RpgrQ9R0X5 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.52□□□□□ -0.4
RpgrQ9R0X5 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
RpgrQ9R0X5 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.52□□□□□ -0.4
RpgrQ9R0X5 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
RpgrQ9R0X5 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
RpgrQ9R0X5 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RpgrQ9R0X5 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RpgrQ9R0X5 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.52□□□□□ -0.41
RpgrQ9R0X5 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
RpgrQ9R0X5 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RpgrQ9R0X5 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.52□□□□□ -0.41
RpgrQ9R0X5 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
RpgrQ9R0X5 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
RpgrQ9R0X5 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.52□□□□□ -0.41
RpgrQ9R0X5 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.52□□□□□ -0.41
RpgrQ9R0X5 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
RpgrQ9R0X5 Gm7029-201ENSMUST00000173226 450 ntBASIC12.52□□□□□ -0.41
RpgrQ9R0X5 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.52□□□□□ -0.41
RpgrQ9R0X5 AY702102-202ENSMUST00000194651 1173 ntBASIC12.52□□□□□ -0.41
RpgrQ9R0X5 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.52□□□□□ -0.41
RpgrQ9R0X5 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.52□□□□□ -0.41
RpgrQ9R0X5 Gm18584-201ENSMUST00000203098 964 ntBASIC12.52□□□□□ -0.41
RpgrQ9R0X5 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
RpgrQ9R0X5 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.52□□□□□ -0.41
RpgrQ9R0X5 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
RpgrQ9R0X5 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
RpgrQ9R0X5 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
RpgrQ9R0X5 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RpgrQ9R0X5 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
RpgrQ9R0X5 Mir339-201ENSMUST00000083659 96 ntBASIC12.52□□□□□ -0.41
RpgrQ9R0X5 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.52□□□□□ -0.41
RpgrQ9R0X5 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RpgrQ9R0X5 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RpgrQ9R0X5 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RpgrQ9R0X5 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RpgrQ9R0X5 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RpgrQ9R0X5 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
RpgrQ9R0X5 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RpgrQ9R0X5 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RpgrQ9R0X5 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RpgrQ9R0X5 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RpgrQ9R0X5 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
RpgrQ9R0X5 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RpgrQ9R0X5 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RpgrQ9R0X5 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RpgrQ9R0X5 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RpgrQ9R0X5 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
RpgrQ9R0X5 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
RpgrQ9R0X5 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RpgrQ9R0X5 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.51□□□□□ -0.41
RpgrQ9R0X5 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
RpgrQ9R0X5 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
RpgrQ9R0X5 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
RpgrQ9R0X5 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
RpgrQ9R0X5 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.51□□□□□ -0.41
RpgrQ9R0X5 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.51□□□□□ -0.41
RpgrQ9R0X5 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.51□□□□□ -0.41
RpgrQ9R0X5 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
RpgrQ9R0X5 Gm12742-201ENSMUST00000117326 410 ntBASIC12.51□□□□□ -0.41
RpgrQ9R0X5 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.51□□□□□ -0.41
RpgrQ9R0X5 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.51□□□□□ -0.41
RpgrQ9R0X5 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RpgrQ9R0X5 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RpgrQ9R0X5 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RpgrQ9R0X5 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
RpgrQ9R0X5 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.51□□□□□ -0.41
RpgrQ9R0X5 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.51□□□□□ -0.41
RpgrQ9R0X5 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC12.51□□□□□ -0.41
RpgrQ9R0X5 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.51□□□□□ -0.41
RpgrQ9R0X5 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.51□□□□□ -0.41
RpgrQ9R0X5 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RpgrQ9R0X5 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RpgrQ9R0X5 Gm24526-201ENSMUST00000082921 158 ntBASIC12.51□□□□□ -0.41
RpgrQ9R0X5 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
RpgrQ9R0X5 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RpgrQ9R0X5 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RpgrQ9R0X5 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
RpgrQ9R0X5 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RpgrQ9R0X5 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
RpgrQ9R0X5 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
RpgrQ9R0X5 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
RpgrQ9R0X5 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.51□□□□□ -0.41
RpgrQ9R0X5 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RpgrQ9R0X5 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RpgrQ9R0X5 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms