Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 Ighv5-7-201ENSMUST00000192302 244 ntBASIC13.2□□□□□ -0.3
Cpsf3Q9QXK7 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cpsf3Q9QXK7 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cpsf3Q9QXK7 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Cpsf3Q9QXK7 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cpsf3Q9QXK7 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cpsf3Q9QXK7 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cpsf3Q9QXK7 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cpsf3Q9QXK7 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpsf3Q9QXK7 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpsf3Q9QXK7 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpsf3Q9QXK7 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC13.2□□□□□ -0.3
Cpsf3Q9QXK7 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpsf3Q9QXK7 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpsf3Q9QXK7 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpsf3Q9QXK7 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpsf3Q9QXK7 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpsf3Q9QXK7 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpsf3Q9QXK7 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Cpsf3Q9QXK7 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cpsf3Q9QXK7 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpsf3Q9QXK7 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Cpsf3Q9QXK7 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpsf3Q9QXK7 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpsf3Q9QXK7 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpsf3Q9QXK7 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpsf3Q9QXK7 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Cpsf3Q9QXK7 Gm11989-201ENSMUST00000117240 672 ntBASIC13.19□□□□□ -0.3
Cpsf3Q9QXK7 Gm11362-201ENSMUST00000118838 850 ntBASIC13.19□□□□□ -0.3
Cpsf3Q9QXK7 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC13.19□□□□□ -0.3
Cpsf3Q9QXK7 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC13.19□□□□□ -0.3
Cpsf3Q9QXK7 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Cpsf3Q9QXK7 Gm2383-201ENSMUST00000181461 807 ntBASIC13.19□□□□□ -0.3
Cpsf3Q9QXK7 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC13.19□□□□□ -0.3
Cpsf3Q9QXK7 Gm18711-201ENSMUST00000199341 750 ntBASIC13.19□□□□□ -0.3
Cpsf3Q9QXK7 Gm44262-201ENSMUST00000204969 372 ntBASIC13.19□□□□□ -0.3
Cpsf3Q9QXK7 Gm8913-201ENSMUST00000209491 641 ntBASIC13.19□□□□□ -0.3
Cpsf3Q9QXK7 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.19□□□□□ -0.3
Cpsf3Q9QXK7 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cpsf3Q9QXK7 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpsf3Q9QXK7 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpsf3Q9QXK7 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cpsf3Q9QXK7 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpsf3Q9QXK7 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC13.19□□□□□ -0.3
Cpsf3Q9QXK7 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpsf3Q9QXK7 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpsf3Q9QXK7 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Cpsf3Q9QXK7 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpsf3Q9QXK7 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Cpsf3Q9QXK7 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpsf3Q9QXK7 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Cpsf3Q9QXK7 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cpsf3Q9QXK7 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Cpsf3Q9QXK7 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Cpsf3Q9QXK7 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpsf3Q9QXK7 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Cpsf3Q9QXK7 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpsf3Q9QXK7 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Cpsf3Q9QXK7 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpsf3Q9QXK7 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cpsf3Q9QXK7 Gm18782-201ENSMUST00000209023 1399 ntBASIC13.19□□□□□ -0.3
Cpsf3Q9QXK7 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpsf3Q9QXK7 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpsf3Q9QXK7 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpsf3Q9QXK7 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpsf3Q9QXK7 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpsf3Q9QXK7 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpsf3Q9QXK7 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpsf3Q9QXK7 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpsf3Q9QXK7 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Cpsf3Q9QXK7 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpsf3Q9QXK7 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpsf3Q9QXK7 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Cpsf3Q9QXK7 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cpsf3Q9QXK7 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpsf3Q9QXK7 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cpsf3Q9QXK7 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cpsf3Q9QXK7 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Cpsf3Q9QXK7 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cpsf3Q9QXK7 Gm23912-201ENSMUST00000104687 87 ntBASIC13.18□□□□□ -0.3
Cpsf3Q9QXK7 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Cpsf3Q9QXK7 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cpsf3Q9QXK7 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cpsf3Q9QXK7 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC13.18□□□□□ -0.3
Cpsf3Q9QXK7 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Cpsf3Q9QXK7 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpsf3Q9QXK7 Aprt-ps-201ENSMUST00000212311 505 ntBASIC13.18□□□□□ -0.3
Cpsf3Q9QXK7 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC13.18□□□□□ -0.3
Cpsf3Q9QXK7 CT573034.1-201ENSMUST00000222983 313 ntBASIC13.18□□□□□ -0.3
Cpsf3Q9QXK7 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpsf3Q9QXK7 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpsf3Q9QXK7 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpsf3Q9QXK7 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpsf3Q9QXK7 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpsf3Q9QXK7 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpsf3Q9QXK7 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cpsf3Q9QXK7 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpsf3Q9QXK7 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cpsf3Q9QXK7 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cpsf3Q9QXK7 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms