Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm6082-201ENSMUST00000215204 454 ntBASIC11.8□□□□□ -0.52
Upk3aQ9JKX8 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC11.8□□□□□ -0.52
Upk3aQ9JKX8 AC123665.1-201ENSMUST00000228204 438 ntBASIC11.8□□□□□ -0.52
Upk3aQ9JKX8 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Upk3aQ9JKX8 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Upk3aQ9JKX8 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Upk3aQ9JKX8 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Upk3aQ9JKX8 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Upk3aQ9JKX8 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Upk3aQ9JKX8 Gm10782-202ENSMUST00000223775 1480 ntBASIC11.8□□□□□ -0.52
Upk3aQ9JKX8 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Upk3aQ9JKX8 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Upk3aQ9JKX8 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Upk3aQ9JKX8 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Upk3aQ9JKX8 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.8□□□□□ -0.52
Upk3aQ9JKX8 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.8□□□□□ -0.52
Upk3aQ9JKX8 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Upk3aQ9JKX8 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Upk3aQ9JKX8 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Upk3aQ9JKX8 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Upk3aQ9JKX8 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Upk3aQ9JKX8 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
Upk3aQ9JKX8 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Upk3aQ9JKX8 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Upk3aQ9JKX8 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Upk3aQ9JKX8 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Upk3aQ9JKX8 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Upk3aQ9JKX8 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Upk3aQ9JKX8 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Upk3aQ9JKX8 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Upk3aQ9JKX8 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.79□□□□□ -0.52
Upk3aQ9JKX8 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Upk3aQ9JKX8 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Upk3aQ9JKX8 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Upk3aQ9JKX8 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Upk3aQ9JKX8 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Upk3aQ9JKX8 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.79□□□□□ -0.52
Upk3aQ9JKX8 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.79□□□□□ -0.52
Upk3aQ9JKX8 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Upk3aQ9JKX8 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Upk3aQ9JKX8 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Upk3aQ9JKX8 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Upk3aQ9JKX8 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.79□□□□□ -0.52
Upk3aQ9JKX8 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.79□□□□□ -0.52
Upk3aQ9JKX8 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.79□□□□□ -0.52
Upk3aQ9JKX8 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Upk3aQ9JKX8 Gm25890-201ENSMUST00000177643 165 ntBASIC11.79□□□□□ -0.52
Upk3aQ9JKX8 Rnu1b2-201ENSMUST00000178073 165 ntBASIC11.79□□□□□ -0.52
Upk3aQ9JKX8 Rnu1b1-201ENSMUST00000178250 165 ntBASIC11.79□□□□□ -0.52
Upk3aQ9JKX8 Gm22614-201ENSMUST00000178300 165 ntBASIC11.79□□□□□ -0.52
Upk3aQ9JKX8 Gm5706-201ENSMUST00000181525 993 ntBASIC11.79□□□□□ -0.52
Upk3aQ9JKX8 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Upk3aQ9JKX8 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Upk3aQ9JKX8 AC154171.1-201ENSMUST00000224610 643 ntBASIC11.79□□□□□ -0.52
Upk3aQ9JKX8 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Upk3aQ9JKX8 Gm22042-201ENSMUST00000082989 165 ntBASIC11.79□□□□□ -0.52
Upk3aQ9JKX8 Gm26110-201ENSMUST00000083971 165 ntBASIC11.79□□□□□ -0.52
Upk3aQ9JKX8 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Upk3aQ9JKX8 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Upk3aQ9JKX8 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Upk3aQ9JKX8 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Upk3aQ9JKX8 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Upk3aQ9JKX8 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Upk3aQ9JKX8 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Upk3aQ9JKX8 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Upk3aQ9JKX8 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Upk3aQ9JKX8 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Upk3aQ9JKX8 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Upk3aQ9JKX8 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Upk3aQ9JKX8 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Upk3aQ9JKX8 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Upk3aQ9JKX8 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Upk3aQ9JKX8 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Upk3aQ9JKX8 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Upk3aQ9JKX8 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Upk3aQ9JKX8 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.79□□□□□ -0.52
Upk3aQ9JKX8 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk3aQ9JKX8 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk3aQ9JKX8 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Upk3aQ9JKX8 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.78□□□□□ -0.52
Upk3aQ9JKX8 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk3aQ9JKX8 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk3aQ9JKX8 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Upk3aQ9JKX8 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk3aQ9JKX8 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk3aQ9JKX8 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.78□□□□□ -0.52
Upk3aQ9JKX8 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk3aQ9JKX8 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk3aQ9JKX8 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk3aQ9JKX8 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk3aQ9JKX8 Gm12715-201ENSMUST00000121430 1128 ntBASIC11.78□□□□□ -0.52
Upk3aQ9JKX8 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk3aQ9JKX8 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.78□□□□□ -0.52
Upk3aQ9JKX8 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Upk3aQ9JKX8 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Upk3aQ9JKX8 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Upk3aQ9JKX8 Gm44651-201ENSMUST00000207343 372 ntBASIC11.78□□□□□ -0.52
Upk3aQ9JKX8 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.78□□□□□ -0.52
Upk3aQ9JKX8 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.78□□□□□ -0.52
Upk3aQ9JKX8 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms