Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC9.79□□□□□ -0.84
Smco4Q9JIS3 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC9.79□□□□□ -0.84
Smco4Q9JIS3 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Smco4Q9JIS3 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Smco4Q9JIS3 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Smco4Q9JIS3 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Smco4Q9JIS3 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Smco4Q9JIS3 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Smco4Q9JIS3 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Smco4Q9JIS3 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Smco4Q9JIS3 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Smco4Q9JIS3 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Smco4Q9JIS3 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Smco4Q9JIS3 Dysf-211ENSMUST00000168387 6501 ntTSL 5 BASIC9.79□□□□□ -0.84
Smco4Q9JIS3 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Smco4Q9JIS3 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Smco4Q9JIS3 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Smco4Q9JIS3 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Smco4Q9JIS3 Gm6124-201ENSMUST00000188240 2580 ntBASIC9.79□□□□□ -0.84
Smco4Q9JIS3 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Smco4Q9JIS3 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Smco4Q9JIS3 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Smco4Q9JIS3 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Smco4Q9JIS3 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Smco4Q9JIS3 Spen-202ENSMUST00000105786 12299 ntAPPRIS P3 TSL 5 BASIC9.79□□□□□ -0.84
Smco4Q9JIS3 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Smco4Q9JIS3 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Smco4Q9JIS3 Gm19692-201ENSMUST00000203856 2084 ntBASIC9.79□□□□□ -0.84
Smco4Q9JIS3 Gm14005-209ENSMUST00000224993 1832 ntBASIC9.79□□□□□ -0.84
Smco4Q9JIS3 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Smco4Q9JIS3 Gm28693-201ENSMUST00000189622 2638 ntBASIC9.79□□□□□ -0.84
Smco4Q9JIS3 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Smco4Q9JIS3 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Smco4Q9JIS3 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Smco4Q9JIS3 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Smco4Q9JIS3 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Smco4Q9JIS3 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC9.79□□□□□ -0.84
Smco4Q9JIS3 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Smco4Q9JIS3 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smco4Q9JIS3 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smco4Q9JIS3 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smco4Q9JIS3 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smco4Q9JIS3 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smco4Q9JIS3 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smco4Q9JIS3 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smco4Q9JIS3 Slc1a2-202ENSMUST00000080210 11595 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smco4Q9JIS3 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smco4Q9JIS3 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smco4Q9JIS3 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC9.78□□□□□ -0.84
Smco4Q9JIS3 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Smco4Q9JIS3 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smco4Q9JIS3 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smco4Q9JIS3 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Smco4Q9JIS3 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smco4Q9JIS3 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC9.78□□□□□ -0.84
Smco4Q9JIS3 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC9.78□□□□□ -0.84
Smco4Q9JIS3 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Smco4Q9JIS3 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC9.78□□□□□ -0.84
Smco4Q9JIS3 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC9.78□□□□□ -0.84
Smco4Q9JIS3 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC9.78□□□□□ -0.84
Smco4Q9JIS3 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC9.78□□□□□ -0.84
Smco4Q9JIS3 Gm24420-201ENSMUST00000176676 59 ntBASIC9.78□□□□□ -0.84
Smco4Q9JIS3 Gm33320-201ENSMUST00000192232 530 ntBASIC9.78□□□□□ -0.84
Smco4Q9JIS3 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC9.78□□□□□ -0.84
Smco4Q9JIS3 Gm6916-202ENSMUST00000205523 195 ntBASIC9.78□□□□□ -0.84
Smco4Q9JIS3 AC166341.4-201ENSMUST00000220625 123 ntBASIC9.78□□□□□ -0.84
Smco4Q9JIS3 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smco4Q9JIS3 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smco4Q9JIS3 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smco4Q9JIS3 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC9.78□□□□□ -0.84
Smco4Q9JIS3 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smco4Q9JIS3 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Smco4Q9JIS3 Gm9816-201ENSMUST00000122292 1414 ntBASIC9.78□□□□□ -0.84
Smco4Q9JIS3 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC9.78□□□□□ -0.84
Smco4Q9JIS3 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Smco4Q9JIS3 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC9.78□□□□□ -0.84
Smco4Q9JIS3 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smco4Q9JIS3 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smco4Q9JIS3 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smco4Q9JIS3 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Smco4Q9JIS3 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Smco4Q9JIS3 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smco4Q9JIS3 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smco4Q9JIS3 Atg2a-201ENSMUST00000045351 6371 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smco4Q9JIS3 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smco4Q9JIS3 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smco4Q9JIS3 Myom2-201ENSMUST00000033842 5075 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Smco4Q9JIS3 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Smco4Q9JIS3 Tns1-217ENSMUST00000191104 9904 ntAPPRIS P3 TSL 5 BASIC9.77□□□□□ -0.84
Smco4Q9JIS3 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.84
Smco4Q9JIS3 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Smco4Q9JIS3 Ezr-201ENSMUST00000064234 3164 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Smco4Q9JIS3 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Smco4Q9JIS3 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.84
Smco4Q9JIS3 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Smco4Q9JIS3 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Smco4Q9JIS3 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Smco4Q9JIS3 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Smco4Q9JIS3 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Smco4Q9JIS3 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms