Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Trim39Q9ESN2 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim39Q9ESN2 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim39Q9ESN2 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim39Q9ESN2 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.58□□□□□ -0.56
Trim39Q9ESN2 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trim39Q9ESN2 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.58□□□□□ -0.56
Trim39Q9ESN2 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim39Q9ESN2 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim39Q9ESN2 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Trim39Q9ESN2 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim39Q9ESN2 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim39Q9ESN2 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim39Q9ESN2 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.58□□□□□ -0.56
Trim39Q9ESN2 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim39Q9ESN2 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim39Q9ESN2 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim39Q9ESN2 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.57□□□□□ -0.56
Trim39Q9ESN2 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim39Q9ESN2 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.57□□□□□ -0.56
Trim39Q9ESN2 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim39Q9ESN2 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.57□□□□□ -0.56
Trim39Q9ESN2 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim39Q9ESN2 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim39Q9ESN2 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.57□□□□□ -0.56
Trim39Q9ESN2 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.57□□□□□ -0.56
Trim39Q9ESN2 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim39Q9ESN2 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.57□□□□□ -0.56
Trim39Q9ESN2 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Trim39Q9ESN2 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.57□□□□□ -0.56
Trim39Q9ESN2 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.57□□□□□ -0.56
Trim39Q9ESN2 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Trim39Q9ESN2 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim39Q9ESN2 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim39Q9ESN2 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim39Q9ESN2 Daam2-202ENSMUST00000224595 1926 ntBASIC11.57□□□□□ -0.56
Trim39Q9ESN2 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim39Q9ESN2 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim39Q9ESN2 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim39Q9ESN2 Gm14704-201ENSMUST00000120300 874 ntBASIC11.57□□□□□ -0.56
Trim39Q9ESN2 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC11.57□□□□□ -0.56
Trim39Q9ESN2 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.57□□□□□ -0.56
Trim39Q9ESN2 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim39Q9ESN2 Gm5896-201ENSMUST00000189662 1024 ntBASIC11.57□□□□□ -0.56
Trim39Q9ESN2 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim39Q9ESN2 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.57□□□□□ -0.56
Trim39Q9ESN2 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.57□□□□□ -0.56
Trim39Q9ESN2 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.57□□□□□ -0.56
Trim39Q9ESN2 E330011O21Rik-205ENSMUST00000211317 1062 ntTSL 5 BASIC11.57□□□□□ -0.56
Trim39Q9ESN2 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.57□□□□□ -0.56
Trim39Q9ESN2 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim39Q9ESN2 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Trim39Q9ESN2 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim39Q9ESN2 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Trim39Q9ESN2 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim39Q9ESN2 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Trim39Q9ESN2 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim39Q9ESN2 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim39Q9ESN2 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.57□□□□□ -0.56
Trim39Q9ESN2 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Trim39Q9ESN2 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Trim39Q9ESN2 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim39Q9ESN2 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim39Q9ESN2 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim39Q9ESN2 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim39Q9ESN2 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Trim39Q9ESN2 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Trim39Q9ESN2 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim39Q9ESN2 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Trim39Q9ESN2 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Trim39Q9ESN2 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim39Q9ESN2 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim39Q9ESN2 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim39Q9ESN2 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim39Q9ESN2 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim39Q9ESN2 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim39Q9ESN2 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.56□□□□□ -0.56
Trim39Q9ESN2 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim39Q9ESN2 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11.56□□□□□ -0.56
Trim39Q9ESN2 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.56□□□□□ -0.56
Trim39Q9ESN2 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trim39Q9ESN2 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.56□□□□□ -0.56
Trim39Q9ESN2 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim39Q9ESN2 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim39Q9ESN2 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim39Q9ESN2 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.56□□□□□ -0.56
Trim39Q9ESN2 Gm37368-201ENSMUST00000193173 3212 ntBASIC11.56□□□□□ -0.56
Trim39Q9ESN2 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC11.56□□□□□ -0.56
Trim39Q9ESN2 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC11.56□□□□□ -0.56
Trim39Q9ESN2 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim39Q9ESN2 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.56□□□□□ -0.56
Trim39Q9ESN2 AC132467.2-202ENSMUST00000227726 559 ntBASIC11.56□□□□□ -0.56
Trim39Q9ESN2 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Trim39Q9ESN2 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim39Q9ESN2 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC11.56□□□□□ -0.56
Trim39Q9ESN2 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim39Q9ESN2 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim39Q9ESN2 n-R5s77-201ENSMUST00000083757 119 ntBASIC11.56□□□□□ -0.56
Trim39Q9ESN2 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim39Q9ESN2 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms